Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr1 : 28,169,697


PPP1R8 - 1p35.3

protein phosphatase 1 regulatory subunit 8

Locus: 1p35.3Orientation: +
View position on Gene View: PPP1R8
Position in mRNA: 493 (phase: 0)
View position 165 on canonical UniProt sequence: Q12972 Residue: N
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 3V4Y B 165 1 (canonical sequence)
Mapping to Pathway Maps for Q12972
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547