Map Genomic Position to Protein Sequence and 3D Structure


This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).

Chromosome chr1 : 40,204,603

PPIE - 1p34.2

peptidylprolyl isomerase E

Locus: 1p34.2Orientation: +
View position on Gene View: PPIE
Position in mRNA: 31 (phase: 0)
View position 11 on canonical UniProt sequence: Q9UNP9 Residue: G
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 2CQB A 11 1 (canonical sequence)
Mapping to Pathway Maps for Q9UNP9
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547