Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr11 : 116,619,291


BUD13 - 11q23.3

BUD13 homolog

Locus: 11q23.3Orientation: -
View position on Gene View: BUD13
Position in mRNA: 1365 (phase: 2)
UniProt mapping via isoform 2 (position on isoform:455)
View position 589 on canonical UniProt sequence: Q9BRD0 Residue: R
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 5Z56 Z 589 1 (canonical sequence)
Mapping to Pathway Maps for Q9BRD0
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547