Map Genomic Position to Protein Sequence and 3D Structure


This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).

Chromosome chr11 : 60,899,304

PRPF19 - 11q12.2

pre-mRNA processing factor 19

Locus: 11q12.2Orientation: -
View position on Gene View: PRPF19
Position in mRNA: 829 (phase: 0)
View position 277 on canonical UniProt sequence: Q9UMS4 Residue: D
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 4LG8 A 277 1 (canonical sequence)
Mapping to Pathway Maps for Q9UMS4
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547