Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr12 : 49,580,394


TUBA1A - 12q13.12

tubulin alpha 1a

Locus: 12q13.12Orientation: -
View position on Gene View: TUBA1A
Position in mRNA: 226 (phase: 0)
View position 76 on canonical UniProt sequence: Q71U36 Residue: D
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 5JCO A 76 1 (canonical sequence)
Mapping to Pathway Maps for Q71U36
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547