Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr12 : 6,838,615


COPS7A - 12p13.31

COP9 signalosome subunit 7A

Locus: 12p13.31Orientation: +
View position on Gene View: COPS7A
Position in mRNA: 530 (phase: 1)
View position 177 on canonical UniProt sequence: Q9UBW8 Residue: W
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 4D10 G 177 1 (canonical sequence)
Mapping to Pathway Maps for Q9UBW8
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547