Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr16 : 23,507,099


GGA2 - 16p12.2

golgi associated, gamma adaptin ear containing, ARF binding protein 2

Locus: 16p12.2Orientation: -
View position on Gene View: GGA2
Position in mRNA: 92 (phase: 1)
View position 31 on canonical UniProt sequence: Q9UJY4 Residue: N
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 1MHQ A 31 1 (canonical sequence)
Mapping to Pathway Maps for Q9UJY4
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547