Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr16 : 70,566,523


SF3B3 - 16q22.1

splicing factor 3b subunit 3

Locus: 16q22.1Orientation: +
View position on Gene View: SF3B3
Position in mRNA: 712 (phase: 0)
View position 238 on canonical UniProt sequence: Q15393 Residue: V
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 6EN4 A 238 1 (canonical sequence)
Mapping to Pathway Maps for Q15393
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547