Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr17 : 1,554,708


PRPF8 - 17p13.3

pre-mRNA processing factor 8

Locus: 17p13.3Orientation: -
View position on Gene View: PRPF8
In UTR region.
None of the available UniProt isoforms matches the mRNA of this gene.
View canonical UniProt sequence: Q6P2Q9
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 4KIT C 2217 1 (canonical sequence)
Mapping to Pathway Maps for Q6P2Q9
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547