Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr17 : 30,781,637


PSMD11 - 17q11.2

proteasome 26S subunit, non-ATPase 11

Locus: 17q11.2Orientation: +
View position on Gene View: PSMD11
Position in mRNA: 318 (phase: 2)
View position 106 on canonical UniProt sequence: O00231 Residue: E
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 6MSB X 106 1 (canonical sequence)
Mapping to Pathway Maps for O00231
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547