Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr19 : 40,486,569


PSMC4 - 19q13.11-q13.13

proteasome 26S subunit, ATPase 4

Locus: 19q13.11-q13.13Orientation: +
View position on Gene View: PSMC4
Position in mRNA: 1088 (phase: 1)
View position 363 on canonical UniProt sequence: P43686 Residue: Y
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 2DVW B 363 1 (canonical sequence)
Mapping to Pathway Maps for P43686
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547