Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr20 : 60,712,005


PSMA7 - 20q13.33

proteasome subunit alpha 7

Locus: 20q13.33Orientation: -
View position on Gene View: PSMA7
Position in mRNA: 655 (phase: 0)
View position 219 on canonical UniProt sequence: O14818 Residue: I
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 5LE5 C 219 1 (canonical sequence)
Mapping to Pathway Maps for O14818
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547