Map Genomic Position to Protein Sequence and 3D Structure


This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).

Chromosome chr6 : 133,137,702

RPS12 - 6q23.2

ribosomal protein S12

Locus: 6q23.2Orientation: +
View position on Gene View: RPS12
Position in mRNA: 234 (phase: 2)
View position 78 on canonical UniProt sequence: P25398 Residue: K
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 5VYC M1 78 1 (canonical sequence)
Mapping to Pathway Maps for P25398
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547