Map Genomic Position to Protein Sequence and 3D Structure

 

This analysis tool highlights the location of a gene position of the human genome on protein sequence and 3D structure.  

Note: For looking up gene names, please use the top-bar search (example: BRCA1).
 

Chromosome chr9 : 5,463,121


CD274 - 9p24.1

CD274 molecule

Locus: 9p24.1Orientation: +
View position on Gene View: CD274
Position in mRNA: 340 (phase: 0)
UniProt mapping via isoform 2 (position on isoform:114)
View position 228 on canonical UniProt sequence: Q9NZQ7 Residue: E
Mapping to 3D protein structure
3D PDB ID Chain ID PDB position UniProt Isoform Image
 Show in 3D 5J89 A null 2
Mapping to Pathway Maps for Q9NZQ7
Maps:       
Reactions:
      ESCHER  BiGG
Please cite:

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank
A Prlić, T Kalro, R Bhattacharya, C Christie, SK Burley, PW Rose
Bioinformatics, btw547