6QDV

Human post-catalytic P complex spliceosome


Macromolecule Annotations for the Entities in PDB 6QDV

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
2 U2 snRNA (6QDV:2)
  • none
  • none
  • none
5 U5 snRNA (6QDV:5)
  • none
  • none
  • none
6 U6 snRNA (6QDV:6)
  • none
  • none
  • none
7 Eukaryotic initiation factor 4A-III (6QDV:7)
8 RNA-binding protein 8A (6QDV:8)
  • none
  • none
  • none
9 Protein mago nashi homolog 2 (6QDV:9)
A Pre-mRNA-processing-splicing factor 8 (6QDV:A)
B U5 small nuclear ribonucleoprotein 200 kDa helicase (6QDV:B)
  • none
  • none
  • none
C 116 kDa U5 small nuclear ribonucleoprotein component (6QDV:C)
D PRKR-interacting protein 1 (6QDV:D)
  • none
  • none
  • none
E Ligated exons: MINX mRNA (6QDV:E)
  • none
  • none
  • none
F Cactin (6QDV:F)
  • none
  • none
  • none
G Protein FAM32A (6QDV:G)
H Pre-mRNA-splicing factor CWC22 homolog (6QDV:H)
I Intron lariat: MINX RNA (6QDV:I)
J Pleiotropic regulator 1 (6QDV:J)
K SNW domain-containing protein 1 (6QDV:K)
  • none
  • none
  • none
L Protein BUD31 homolog (6QDV:L)
M Pre-mRNA-splicing factor RBM22 (6QDV:M)
N U5 small nuclear ribonucleoprotein 40 kDa protein (6QDV:N)
  • none
  • none
  • none
O Cell division cycle 5-like protein (6QDV:O)
P Spliceosome-associated protein CWC15 homolog (6QDV:P)
R Serine/arginine repetitive matrix protein 2 (6QDV:R)
S Crooked neck-like protein 1 (6QDV:S)
T Pre-mRNA-splicing factor SYF1 (6QDV:T)
U Intron-binding protein aquarius (6QDV:U)
V ATP-dependent RNA helicase DHX8 (6QDV:V)
W U2 small nuclear ribonucleoprotein A' (6QDV:W)
Y U2 small nuclear ribonucleoprotein B'' (6QDV:Y)
  • none
  • none
  • none
Z NF-kappa-B-activating protein (6QDV:Z)
  • none
  • none
  • none
b,k Small nuclear ribonucleoprotein-associated proteins B and B' (6QDV:b,k)
  • none
  • none
  • none
c Pre-mRNA-splicing factor SLU7 (6QDV:c)
  • none
  • none
  • none
d,n Small nuclear ribonucleoprotein Sm D3 (6QDV:d,n)
  • none
  • none
  • none
e,p Small nuclear ribonucleoprotein E (6QDV:e,p)
  • none
  • none
  • none
f,q Small nuclear ribonucleoprotein F (6QDV:f,q)
  • none
  • none
  • none
g,r Small nuclear ribonucleoprotein G (6QDV:g,r)
  • none
  • none
  • none
h,l Small nuclear ribonucleoprotein Sm D1 (6QDV:h,l)
  • none
  • none
  • none
i Peptidyl-prolyl cis-trans isomerase-like 1 (6QDV:i)
  • none
  • none
  • none
j,m Small nuclear ribonucleoprotein Sm D2 (6QDV:j,m)
  • none
  • none
  • none
o Pre-mRNA-processing factor 17 (6QDV:o)
  • none
  • none
  • none
s Pre-mRNA-splicing factor SPF27 (6QDV:s)
  • none
  • none
  • none
t,u,v,w Pre-mRNA-processing factor 19 (6QDV:t,u,v,w)
  • none
  • none
  • none
y Pre-mRNA-splicing factor SYF2 (6QDV:y)
  • none
  • none
  • none
z Replication stress response regulator SDE2 (6QDV:z)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description