Sequence Similarity Clusters for the Entities in PDB 1LEE

Entity #1 | Chains: A
Plasmepsin 2 protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 3856
95 % 10 25 1464 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.1
PDBFlex
90 % 10 25 1488
70 % 10 31 1136
50 % 10 34 1037
40 % 10 34 1077
30 % 37 162 209

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures