Sequence Similarity Clusters for the Entities in PDB 3T5X

Entity #1 | Chains: A
PCI domain-containing protein 2 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67612
95 % 1 1 54693
90 % 1 1 51713
70 % 1 1 45147
50 % 1 1 39030
40 % 1 1 35241
30 % 1 1 31070
Entity #2 | Chains: B
26S proteasome complex subunit DSS1 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 33 1354
95 % 1 33 1828 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 2.7
PDBFlex
90 % 1 33 1906
70 % 1 33 1892
50 % 1 35 1838
40 % 1 35 1876
30 % 1 35 1911

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures