Sequence Similarity Clusters for the Entities in PDB 4RHV

Entity #1 | Chains: 1
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1) protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 26 2168
95 % 2 36 1820 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 2 36 1885
70 % 2 39 1790
50 % 2 39 1827
40 % 14 168 237
30 % 14 170 243
Entity #2 | Chains: 2
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 28 2029
95 % 2 35 1933 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.1
PDBFlex
90 % 2 36 1919
70 % 2 39 1768
50 % 18 213 198
40 % 18 213 210
30 % 21 226 211
Entity #3 | Chains: 3
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 36 1372
95 % 2 36 1836 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.2
PDBFlex
90 % 2 36 1878
70 % 2 39 1776
50 % 19 225 179
40 % 19 227 192
30 % 29 268 129
Entity #4 | Chains: 4
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 35 1455
95 % 2 38 1737 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 2 38 1763
70 % 7 81 773
50 % 17 148 428
40 % 17 148 450
30 % 17 148 463

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures