Sequence Similarity Clusters for the Entities in PDB 5GGQ

Entity #1 | Chains: L
nivolumab light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28821
95 % 20 105 235
90 % 39 235 78
70 % 393 2368 2
50 % 493 3003 2
40 % 493 3003 2
30 % 1012 6095 1
Entity #2 | Chains: H
nivolumab heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 33317
95 % 1 3 20870
90 % 54 322 19
70 % 485 2903 1
50 % 512 3048 1
40 % 512 3048 1
30 % 1013 6095 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures