5GGQ

Crystal structure of Nivolumab Fab fragment


Sequence Similarity Clusters for the Entities in PDB 5GGQ

Entity #1 | Chains: L
nivolumab light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 31562
95 % 27 133 214
90 % 51 282 68
70 % 434 2584 2
50 % 1109 6686 1
40 % 1109 6687 1
30 % 1118 6734 1
Entity #2 | Chains: H
nivolumab heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 35043
95 % 1 3 22433
90 % 65 398 12
70 % 535 3199 1
50 % 1110 6686 1
40 % 1110 6687 1
30 % 1119 6734 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures