Sequence Similarity Clusters for the Entities in PDB 5GGQ

Entity #1 | Chains: L
nivolumab light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24887
95 % 19 104 233
90 % 39 238 78
70 % 390 2330 2
50 % 489 2959 2
40 % 489 2959 2
30 % 1003 6005 1
Entity #2 | Chains: H
nivolumab heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 31089
95 % 1 3 20622
90 % 54 318 19
70 % 481 2860 1
50 % 508 3004 1
40 % 508 3004 1
30 % 1004 6005 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures