5GGT

PD-L1 in complex with BMS-936559 Fab


Sequence Similarity Clusters for the Entities in PDB 5GGT

Entity #1 | Chains: A
Programmed cell death 1 ligand 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 8768
95 % 18 21 1700
90 % 18 21 1729
70 % 18 21 1767
50 % 18 21 1802
40 % 18 21 1842
30 % 19 22 1851
Entity #2 | Chains: H
IgG H chain protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72920
95 % 1 1 59385
90 % 34 49 791
70 % 2055 3192 1
50 % 2168 3370 1
40 % 2169 3371 1
30 % 4321 6719 1
Entity #3 | Chains: L
IGK@ protein protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72921
95 % 89 134 210
90 % 177 281 68
70 % 1688 2578 2
50 % 2124 3301 2
40 % 2124 3301 2
30 % 4322 6719 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures