Sequence Similarity Clusters for the Entities in PDB 5GGU

Entity #1 | Chains: A,H
heavy chain protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 33345
95 % 2 3 17445
90 % 124 322 19
70 % 1009 2903 1
50 % 1068 3048 1
40 % 1068 3048 1
30 % 2121 6095 1
Entity #2 | Chains: B,L
light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 32795
95 % 65 210 78
90 % 185 530 4
70 % 819 2368 2
50 % 1040 3003 2
40 % 1040 3003 2
30 % 2122 6095 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures