Sequence Similarity Clusters for the Entities in PDB 5GGU

Entity #1 | Chains: A,H
heavy chain protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 32753
95 % 2 3 17711
90 % 129 339 16
70 % 1031 2969 1
50 % 1094 3121 1
40 % 1094 3121 1
30 % 2170 6236 1
Entity #2 | Chains: B,L
light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 32752
95 % 67 220 74
90 % 269 797 2
70 % 836 2418 2
50 % 1063 3071 2
40 % 1063 3071 2
30 % 2171 6236 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures