Sequence Similarity Clusters for the Entities in PDB 5HL9

Entity #1 | Chains: A
Penicillin-binding protein 1B protein, length: 747 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 12359
95 % 5 7 12491 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 5 7 12331
70 % 5 7 11608
50 % 5 7 10608
40 % 5 7 10003
30 % 5 7 9261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3VMA 1 A Penicillin-binding protein 1B UNP residues 58-804 562 2.4.1.129 | Details 3.4 | Details
2 5HLB 1 A Penicillin-binding protein 1B 562 2.4.1.129 | Details 3.4 | Details
3 5HLA 1 A Penicillin-binding protein 1B 562 2.4.1.129 | Details 3.4 | Details
4 5HLD 1 A Penicillin-binding protein 1B 562 2.4.1.129 | Details 3.4 | Details
5 5HL9 1 A Penicillin-binding protein 1B 562 2.4.1.129 | Details 3.4 | Details
6 5FGZ 1 A Penicillin-binding protein 1B 562 2.4.1.129 | Details 3.4 | Details
7 3FWL 1 A Penicillin-binding protein 1B residues 54-804 562 2.4.1.129 | Details 3.4 | Details