Sequence Similarity Clusters for the Entities in PDB 5W5H

Entity #1 | Chains: A,C
Interferon-induced protein with tetratricopeptide repeats 1 protein, length: 479 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15373
95 % 7 7 9111 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 7 7 9030
70 % 7 7 8785
50 % 13 13 5065
40 % 13 14 4291
30 % 13 14 4168
Entity #2 | Chains: B,D
RNA (5'-D(*(GTA))-R(P*AP*AP*A)-3') rna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures