Sequence Similarity Clusters for the Entities in PDB 5YN6

Entity #1 | Chains: A
nsp16 protein protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 6374
95 % 6 12 7065 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 6 12 7073
70 % 6 12 6848
50 % 6 15 5208
40 % 6 15 5097
30 % 6 15 4865
Entity #2 | Chains: B
nsp10 protein protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 12 6027
95 % 6 12 7033 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 6 12 6808
70 % 6 12 6916
50 % 6 12 6593
40 % 6 12 6398
30 % 6 12 6038

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures