Sequence Similarity Clusters for the Entities in PDB 5YNO

Entity #1 | Chains: A
nsp16 protein protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 6215
95 % 7 12 7599 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 7 12 7305
70 % 7 12 7397
50 % 7 15 5368
40 % 7 15 5225
30 % 7 15 5052
Entity #2 | Chains: B
nsp10 protein protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 6572
95 % 7 12 6730 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 7 12 6746
70 % 7 12 6639
50 % 7 12 6339
40 % 7 12 6154
30 % 7 12 5844

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures