Sequence Similarity Clusters for the Entities in PDB 5YNO

Entity #1 | Chains: A
nsp16 protein protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 6087
95 % 7 12 6804 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 7 12 6830
70 % 7 12 6695
50 % 7 15 5016
40 % 7 15 4901
30 % 7 15 4688
Entity #2 | Chains: B
nsp10 protein protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 6594
95 % 7 12 7204 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 7 12 7198
70 % 7 12 7070
50 % 7 12 6668
40 % 7 12 6476
30 % 7 12 6059

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures