6DHA

Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Hydroxy Pioglitazone (M-IV)


Sequence Similarity Clusters for the Entities in PDB 6DHA

Entity #1 | Chains: A,B
Peroxisome proliferator-activated receptor gamma protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 146 151
95 % 30 224 106
90 % 30 224 112
70 % 7 43 995
50 % 7 43 1033
40 % 7 43 1065
30 % 7 43 1099

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3U9Q 1 A Peroxisome proliferator-activated receptor gamma Ligand Binding Domain, UNP residues 236-504 9606
2 4CI5 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 206-477 9606
3 6K0T 1 A, C Peroxisome proliferator-activated receptor gamma 9606
4 6ONI 1 B Peroxisome proliferator-activated receptor gamma 9606
5 5GTN 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
6 2XKW 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 204-477 9606
7 4Y29 1 A Peroxisome proliferator-activated receptor gamma UNP residues 236-504 9606
8 1ZGY 1 A Peroxisome proliferator activated receptor gamma PPARgamma Ligand Binding Domain 9606
9 2FVJ 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN, RESIDUES 207-477 9606
10 6DHA 1 A, B Peroxisome proliferator-activated receptor gamma 9606
11 5TWO 1 A Peroxisome proliferator-activated receptor gamma lignad binding domain (UNP residues 234-505) 9606
12 5YCP 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
13 4A4W 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 195-477 9606
14 5UGM 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 235-505 9606
15 2YFE 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 195-477 9606
16 3FEJ 1 A Peroxisome proliferator-activated receptor gamma PPAR gamma ligand binding domain 9606
17 4A4V 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 195-477 9606
18 6MD0 1 A, B Peroxisome proliferator-activated receptor gamma 9606
19 6PDZ 1 A, B Peroxisome proliferator-activated receptor gamma 9606
20 6T9C 1 A, B Peroxisome proliferator-activated receptor gamma 9606
21 3VSO 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
22 2GTK 1 A Peroxisome proliferator-activated receptor gamma 9606
23 3KMG 1 A, D Peroxisome proliferator-activated receptor gamma UNP residues 234-505 9606
24 3B0Q 1 A, B Peroxisome proliferator-activated receptor gamma UNP RESIDUES 231-504 9606
25 5HZC 1 A, B Peroxisome proliferator-activated receptor gamma 9606
26 3NOA 1 A, B Peroxisome proliferator-activated receptor gamma lignad binding domain 9606
27 5LSG 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 223-505 9606
28 2HWQ 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
29 6AD9 1 A Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
30 3ADX 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
31 6QJ5 1 A, B Peroxisome proliferator-activated receptor gamma 9606
32 3TY0 1 A, B Peroxisome proliferator-activated receptor gamma 9606
33 5GTO 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 1-283 9606
34 6MCZ 1 A, B Peroxisome proliferator-activated receptor gamma 9606
35 2VSR 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 9-(S)-HODE LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
36 4R06 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 233-505 9606
37 2F4B 1 A, B Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN 9606
38 6IJS 1 A Peroxisome proliferator-activated receptor gamma 9606
39 3WMH 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain, UNP residues 223-504 9606
40 5YCN 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
41 3B0R 1 A, B Peroxisome proliferator-activated receptor gamma UNP RESIDUES 231-504 9606
42 3ADW 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
43 5DWL 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
44 4R2U 1 A, D Peroxisome proliferator-activated receptor gamma UNP residues 231-505 9606
45 3VJH 1 A, B Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-504 9606
46 3FUR 1 A Peroxisome proliferator-activated receptor gamma LBD (ligand binding domain), UNP residues 234-505 9606
47 3R5N 1 A Peroxisome proliferator-activated receptor gamma ligand binding domain (UNP residues 232-505) 9606
48 5TTO 1 A, B Peroxisome proliferator-activated receptor gamma residues 233-505 9606
49 1FM9 2 D PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN - RESIDUES 206 - 477 9606
50 6F2L 1 A, B Peroxisome proliferator-activated receptor gamma 9606
51 5DVC 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
52 3G9E 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN 9606
53 6MD1 1 A, B Peroxisome proliferator-activated receptor gamma 9606
54 2PRG 1 A, B PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LBD (LIGAND BINDING DOMAIN), RESIDUES 207-477 9606
55 6ENQ 1 A, B Peroxisome proliferator-activated receptor gamma 9606
56 6MD2 1 A, B Peroxisome proliferator-activated receptor gamma 9606
57 2I4J 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), residues 223-504 9606
58 1FM6 2 D, X PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN - RESIDUES 206 - 477 9606
59 3H0A 2 D Peroxisome proliferator-activated receptor gamma UNP RESIDUES 234-505 9606
60 2ATH 1 A, B Peroxisome proliferator activated receptor gamma ligand binding domain 9606
61 4YT1 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 223-504 9606
62 6ONJ 1 A Peroxisome proliferator-activated receptor gamma 9606
63 3ADV 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
64 3ADS 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
65 6JEY 1 A, B Peroxisome proliferator-activated receptor gamma 9606
66 6FZP 1 A Peroxisome proliferator-activated receptor gamma 9606
67 2VV1 1 A PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 4-HDHA LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
68 3HOD 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), UNP residues 223-504 9606
69 5GTP 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
70 2P4Y 1 A, B Peroxisome proliferator-activated receptor gamma Ligand-binding Domain (LBD), Residues 231-505 9606
71 5F9B 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 195-477 9606
72 2Q8S 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain (residue 235-505) 9606
73 2POB 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
74 1PRG 1 A, B PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA) LBD (LIGAND BINDING DOMAIN), RESIDUES 207-476 9606
75 3AN3 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
76 2I4Z 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), residues 223-504 9606
77 3X1H 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 232-505 9606
78 5WQX 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 232-505 9606
79 6O67 1 A, B Peroxisome proliferator-activated receptor gamma 9606
80 6MD4 1 A, B Peroxisome proliferator-activated receptor gamma 9606
81 2I4P 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD) 9606
82 3AN4 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
83 5U5L 1 A, B Peroxisome proliferator-activated receptor gamma residues 233-505 9606
84 3GBK 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domian, UNP residues 235-505 9606
85 3QT0 1 A Peroxisome proliferator-activated receptor gamma UNP residues 235-505 9606
86 2VV4 1 A PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 6-OXOOTE LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
87 2G0H 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain(residues 207-477) 9606
88 5WR1 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 232-505 9606
89 2ZK2 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
90 3VSP 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
91 2HWR 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
92 6E5A 1 A, B Peroxisome proliferator-activated receptor gamma Cys 285 was modified by BME adduct in protein buffer 9606
93 3IA6 1 A, B Peroxisome proliferator-activated receptor gamma UNP residue 235-505 9606
94 2VST 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 13-(S)-HODE LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
95 6ILQ 1 A Peroxisome proliferator-activated receptor gamma 9606
96 3X1I 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 232-505 9606
97 3R8I 1 A, B Peroxisome proliferator-activated receptor gamma unp residues 223-505 9606
98 4PVU 1 A, B Peroxisome proliferator-activated receptor gamma Ligand Binding Domain, UNP RESIDUES 223-505 9606
99 3CWD 1 A, B Peroxisome proliferator-activated receptor gamma PPAR gamma LBD domain 9606
100 6DH9 1 A, B Peroxisome proliferator-activated receptor gamma 9606
101 1ZEO 1 A, B Peroxisome proliferator activated receptor gamma Ligand Binding Domain (LBD), residues 203-477 9606
102 2G0G 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain(residues 207-477) 9606
103 2ZNO 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
104 1KNU 1 A, B PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN 9606
105 2ZK0 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
106 2VV0 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA DHA LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
107 6Y3U 1 A Peroxisome proliferator-activated receptor gamma 9606
108 6JQ7 1 A Peroxisome proliferator-activated receptor gamma 9606
109 5DV8 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
110 3D6D 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), UNP residues 223-504 9606
111 6ICJ 1 A Peroxisome proliferator-activated receptor gamma 9606
112 3VJI 1 A, B Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-504 9606
113 3K8S 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 234-505, Ligand binding domain 9606
114 2ZK6 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
115 2ZK5 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
116 5DV3 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
117 4PWL 1 A, B Peroxisome proliferator-activated receptor gamma Ligand Binding Domain, UNP RESIDUES 223-505 9606
118 3ADU 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
119 4JL4 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 223-505 9606
120 3ADT 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
121 4E4Q 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain (UNP residues 223-505) 9606
122 1WM0 1 X Peroxisome proliferator activated receptor gamma residues 186-477 9606
123 5DV6 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
124 5AZV 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 203-505 9606
125 2ZK4 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
126 2VV2 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 5-HEPA LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
127 2ZK3 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
128 3B3K 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 223-504 9606
129 1NYX 1 A, B peroxisome proliferator activated receptor gamma Ligand binding domain 9606
130 2ZK1 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
131 4E4K 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain (UNP residues 223-505) 9606
132 3CDS 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), UNP residues 223-504 9606
133 5DSH 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
134 4FGY 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN, UNP RESIDUES 235-504 9606
135 3HO0 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), UNP residues 223-504 9606
136 2VV3 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 4-OXODHA LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
137 6T6B 1 A Peroxisome proliferator-activated receptor gamma 9606
138 6DGO 1 A, B Peroxisome proliferator-activated receptor gamma 9606
139 3CDP 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), UNP residues 223-504 9606
140 6O68 1 A, B Peroxisome proliferator-activated receptor gamma 9606
141 4JAZ 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 223-505 9606
142 6IJR 1 A, C Peroxisome proliferator-activated receptor gamma 9606
143 4PRG 1 A, B, C, D PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA) 0072 PARTIAL AGONIST COCRYSTAL LIGAND BINDING DOMAIN, RESIDUES 207-476 9606
144 5WR0 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 232-505 9606
145 6JF0 1 A, B Peroxisome proliferator-activated receptor gamma 9606
146 2QMV 1 A Peroxisome proliferator-activated receptor gamma Ligand Binding Domain, residues 235-504 9606