Sequence Similarity Clusters for the Entities in PDB 6DHA

Entity #1 | Chains: A,B
Peroxisome proliferator-activated receptor gamma protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 137 119
95 % 29 213 107 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 29 213 115
70 % 7 43 919
50 % 7 43 953
40 % 7 43 985
30 % 7 43 1032

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3U9Q 1 A Peroxisome proliferator-activated receptor gamma Ligand Binding Domain, UNP residues 236-504 9606
2 4CI5 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 206-477 9606
3 4Y29 1 A Peroxisome proliferator-activated receptor gamma UNP residues 236-504 9606
4 1ZGY 1 A Peroxisome proliferator activated receptor gamma PPARgamma Ligand Binding Domain 9606
5 2FVJ 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN, RESIDUES 207-477 9606
6 5JI0 2 D Peroxisome proliferator-activated receptor gamma 9606
7 6DHA 1 A, B Peroxisome proliferator-activated receptor gamma 9606
8 5TWO 1 A Peroxisome proliferator-activated receptor gamma lignad binding domain (UNP residues 234-505) 9606
9 5UGM 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 235-505 9606
10 3FEJ 1 A Peroxisome proliferator-activated receptor gamma PPAR gamma ligand binding domain 9606
11 2GTK 1 A Peroxisome proliferator-activated receptor gamma 9606
12 3KMG 1 A, D Peroxisome proliferator-activated receptor gamma UNP residues 234-505 9606
13 3NOA 1 A, B Peroxisome proliferator-activated receptor gamma lignad binding domain 9606
14 2HWQ 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
15 4R06 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 233-505 9606
16 2F4B 1 A, B Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN 9606
17 3FUR 1 A Peroxisome proliferator-activated receptor gamma LBD (ligand binding domain), UNP residues 234-505 9606
18 5TTO 1 A, B Peroxisome proliferator-activated receptor gamma residues 233-505 9606
19 1FM9 2 D PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN - RESIDUES 206 - 477 9606
20 3G9E 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN 9606
21 2PRG 1 A, B PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LBD (LIGAND BINDING DOMAIN), RESIDUES 207-477 9606
22 1FM6 2 D, X PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN - RESIDUES 206 - 477 9606
23 3H0A 2 D Peroxisome proliferator-activated receptor gamma UNP RESIDUES 234-505 9606
24 2ATH 1 A, B Peroxisome proliferator activated receptor gamma ligand binding domain 9606
25 2Q8S 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain (residue 235-505) 9606
26 2POB 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
27 1PRG 1 A, B PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA) LBD (LIGAND BINDING DOMAIN), RESIDUES 207-476 9606
28 5U5L 1 A, B Peroxisome proliferator-activated receptor gamma residues 233-505 9606
29 3GBK 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domian, UNP residues 235-505 9606
30 3QT0 1 A Peroxisome proliferator-activated receptor gamma UNP residues 235-505 9606
31 2G0H 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain(residues 207-477) 9606
32 2HWR 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
33 6E5A 1 A, B Peroxisome proliferator-activated receptor gamma Cys 285 was modified by BME adduct in protein buffer 9606
34 3IA6 1 A, B Peroxisome proliferator-activated receptor gamma UNP residue 235-505 9606
35 6ILQ 1 A Peroxisome proliferator-activated receptor gamma 9606
36 3CWD 1 A, B Peroxisome proliferator-activated receptor gamma PPAR gamma LBD domain 9606
37 6DH9 1 A, B Peroxisome proliferator-activated receptor gamma 9606
38 2G0G 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain(residues 207-477) 9606
39 6ICJ 1 A Peroxisome proliferator-activated receptor gamma 9606
40 3K8S 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 234-505, Ligand binding domain 9606
41 4FGY 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN, UNP RESIDUES 235-504 9606
42 4PRG 1 A, B, C, D PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA) 0072 PARTIAL AGONIST COCRYSTAL LIGAND BINDING DOMAIN, RESIDUES 207-476 9606
43 2QMV 1 A Peroxisome proliferator-activated receptor gamma Ligand Binding Domain, residues 235-504 9606