6GZ3

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)


Sequence Similarity Clusters for the Entities in PDB 6GZ3

Entity #1 | Chains: A2
28S ribosomal RNA rna, length: 3612 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: BP
ribosomal protein uS19 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 7171
95 % 17 24 3143
90 % 17 24 3216
70 % 17 24 3254
50 % 80 161 314
40 % 81 166 316
30 % 81 166 337
Entity #11 | Chains: BQ
ribosomal protein uS9 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 70 586
95 % 29 70 794
90 % 29 70 830
70 % 29 73 830
50 % 81 174 260
40 % 81 178 262
30 % 82 179 281
Entity #12 | Chains: BR
ribosomal protein eS17 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 51 951
95 % 35 77 698
90 % 35 77 732
70 % 35 78 750
50 % 80 158 315
40 % 80 158 329
30 % 80 158 349
Entity #13 | Chains: BS
ribosomal protein uS13 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 78 509
95 % 35 78 694
90 % 35 78 726
70 % 84 165 260
50 % 87 174 258
40 % 88 180 254
30 % 88 180 278
Entity #14 | Chains: BT
ribosomal protein eS19 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 40 1082
95 % 35 77 706
90 % 35 77 745
70 % 35 77 769
50 % 35 79 781
40 % 79 156 335
30 % 81 159 340
Entity #15 | Chains: BU
ribosomal protein uS10 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 24 2408
95 % 17 26 2782
90 % 17 26 2850
70 % 17 26 2903
50 % 17 29 2557
40 % 17 33 2260
30 % 401 575 32
Entity #16 | Chains: BZ
ribosomal protein eS25 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 18228
95 % 3 5 18229
90 % 3 5 17875
70 % 3 5 16645
50 % 3 5 14458
40 % 3 5 13446
30 % 3 5 12251
Entity #17 | Chains: Bc
Ribosomal protein S28 protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 15 4715
95 % 11 15 5437
90 % 11 18 4362
70 % 85 173 249
50 % 87 180 242
40 % 88 181 250
30 % 88 181 271
Entity #18 | Chains: Bd
ribosomal protein uS14 protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 71 574
95 % 35 75 735
90 % 35 75 767
70 % 78 151 284
50 % 79 159 317
40 % 79 159 332
30 % 79 159 351
Entity #19 | Chains: Bf
Ribosomal protein S27a protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 25 2329
95 % 17 29 2477
90 % 17 29 2534
70 % 55 71 631
50 % 55 75 634
40 % 55 75 664
30 % 55 75 695
Entity #2 | Chains: Bv
ap/P-site tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: Bg
ribosomal protein RACK 1 protein, length: 314 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 77 496
95 % 36 77 683
90 % 36 77 710
70 % 37 79 720
50 % 84 159 299
40 % 86 165 281
30 % 86 166 303
Entity #21 | Chains: BA
ribosomal protein uS2 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 18 3565
95 % 17 27 2674
90 % 17 27 2797
70 % 17 27 2850
50 % 30 55 1028
40 % 63 120 418
30 % 63 120 433
Entity #22 | Chains: BB
40S ribosomal protein S3a protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 22 2863
95 % 17 26 2792
90 % 17 26 2866
70 % 17 26 2921
50 % 17 29 2561
40 % 17 29 2591
30 % 17 33 2299
Entity #23 | Chains: BC
ribosomal protein uS5 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 15 4595
95 % 17 29 2436
90 % 17 29 2540
70 % 17 32 2356
50 % 30 55 1025
40 % 30 55 1069
30 % 30 55 1106
Entity #24 | Chains: BE
ribosomal protein eS4 protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 6328
95 % 3 12 7473
90 % 35 77 730
70 % 81 163 264
50 % 84 173 264
40 % 84 177 271
30 % 85 182 277
Entity #25 | Chains: BG
40S ribosomal protein S6 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 76 529
95 % 35 77 701
90 % 35 77 736
70 % 39 83 702
50 % 82 164 309
40 % 82 169 309
30 % 82 169 333
Entity #26 | Chains: BH
40S ribosomal protein S7 protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 76 523
95 % 35 77 703
90 % 35 77 741
70 % 35 78 757
50 % 84 170 287
40 % 84 170 303
30 % 86 173 305
Entity #27 | Chains: BI
ribosomal protein eS8 protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 72 564
95 % 35 77 712
90 % 35 77 744
70 % 35 77 771
50 % 84 172 267
40 % 84 176 274
30 % 84 176 298
Entity #28 | Chains: BJ
Ribosomal protein S9 (Predicted) protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 77 522
95 % 35 77 710
90 % 35 77 743
70 % 84 167 258
50 % 87 182 236
40 % 87 186 242
30 % 87 186 256
Entity #29 | Chains: BL
Ribosomal protein S11 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 78 505
95 % 35 78 688
90 % 35 78 719
70 % 35 79 741
50 % 85 179 244
40 % 85 179 256
30 % 85 179 280
Entity #3 | Chains: Bx
mRNA rna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #30 | Chains: BN
ribosomal protein uS15 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 77 516
95 % 35 77 697
90 % 35 77 731
70 % 85 172 250
50 % 87 179 246
40 % 88 184 244
30 % 88 184 259
Entity #31 | Chains: BO
ribosomal protein uS11 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 65 633
95 % 30 65 860
90 % 36 73 792
70 % 87 180 231
50 % 87 181 240
40 % 87 181 252
30 % 87 181 276
Entity #32 | Chains: BV
ribosomal protein eS21 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 62 681
95 % 35 76 721
90 % 35 76 753
70 % 35 77 774
50 % 77 153 330
40 % 77 153 343
30 % 77 153 361
Entity #33 | Chains: BW
Ribosomal protein S15a protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 78 502
95 % 35 78 690
90 % 35 78 720
70 % 86 183 236
50 % 88 185 231
40 % 89 190 238
30 % 476 744 23
Entity #34 | Chains: BX
Ribosomal protein S23 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 76 535
95 % 35 80 670
90 % 35 81 695
70 % 87 186 213
50 % 88 192 227
40 % 88 192 236
30 % 88 192 248
Entity #35 | Chains: BY
ribosomal protein eS24 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 72 565
95 % 35 77 711
90 % 35 77 735
70 % 35 78 753
50 % 82 174 273
40 % 82 174 288
30 % 82 174 311
Entity #36 | Chains: Ba
ribosomal protein eS26 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 26 2230
95 % 17 29 2467
90 % 17 29 2498
70 % 17 29 2572
50 % 55 80 535
40 % 55 80 579
30 % 55 80 602
Entity #37 | Chains: Bb
ribosomal protein eS27 protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 77 520
95 % 35 77 707
90 % 35 77 740
70 % 79 163 266
50 % 81 169 275
40 % 81 169 289
30 % 81 169 313
Entity #38 | Chains: Be
ribosomal protein eS30 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 36 1441
95 % 12 36 1832
90 % 20 49 1391
70 % 20 51 1364
50 % 81 152 371
40 % 81 152 395
30 % 81 152 409
Entity #39 | Chains: A3
5.8S ribosomal RNA rna, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: Bw
pe/E-site-tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #40 | Chains: A4
5S ribosomal RNA rna, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #41 | Chains: AA
Ribosomal protein L8 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 68 659
95 % 30 68 899
90 % 30 68 933
70 % 87 161 274
50 % 88 174 276
40 % 156 245 198
30 % 156 245 210
Entity #42 | Chains: AB
ribosomal protein uL3 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2321
95 % 30 68 886
90 % 30 68 916
70 % 30 69 942
50 % 90 185 245
40 % 90 185 257
30 % 90 187 270
Entity #43 | Chains: AC
ribosomal protein uL4 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 7357
95 % 21 39 1722
90 % 21 39 1766
70 % 21 39 1789
50 % 79 147 341
40 % 89 185 260
30 % 89 185 282
Entity #44 | Chains: AD
ribosomal protein uL18 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2320
95 % 30 68 889
90 % 30 68 938
70 % 30 68 978
50 % 88 170 294
40 % 89 172 294
30 % 89 172 320
Entity #45 | Chains: AE
ribosomal protein eL6 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 27261
95 % 2 4 20542
90 % 2 4 20084
70 % 2 4 18545
50 % 2 4 17247
40 % 60 102 461
30 % 60 102 477
Entity #46 | Chains: AF
ribosomal protein uL30 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 32 1649
95 % 30 68 905
90 % 30 68 940
70 % 30 68 980
50 % 88 173 281
40 % 88 173 293
30 % 88 172 325
Entity #47 | Chains: AG
ribosomal protein eL8 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2316
95 % 19 49 1349
90 % 19 49 1384
70 % 19 49 1412
50 % 81 156 333
40 % 81 158 341
30 % 81 158 359
Entity #48 | Chains: AH
ribosomal protein uL6 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 34 1554
95 % 30 68 908
90 % 30 68 944
70 % 30 68 987
50 % 88 180 268
40 % 89 181 272
30 % 157 253 203
Entity #49 | Chains: AI
Ribosomal protein L10 (Predicted) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 14 4883
95 % 30 68 887
90 % 30 68 926
70 % 30 76 845
50 % 82 163 312
40 % 82 163 325
30 % 82 163 344
Entity #5 | Chains: B1
18S ribosomal RNA rna, length: 1708 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #50 | Chains: AJ
Ribosomal protein L11 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 61 754
95 % 31 69 876
90 % 31 69 904
70 % 89 173 257
50 % 91 177 266
40 % 91 177 284
30 % 91 177 307
Entity #51 | Chains: AL
ribosomal protein eL13 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2291
95 % 30 67 936
90 % 30 67 972
70 % 30 67 1009
50 % 30 69 1001
40 % 87 170 308
30 % 87 170 331
Entity #52 | Chains: AM
ribosomal protein eL14 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 7143
95 % 17 25 2901
90 % 17 28 2628
70 % 17 28 2661
50 % 17 28 2667
40 % 17 29 2642
30 % 17 29 2619
Entity #53 | Chains: AN
Ribosomal protein L15 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 68 674
95 % 30 68 906
90 % 30 68 941
70 % 88 170 263
50 % 90 184 249
40 % 90 184 264
30 % 90 184 287
Entity #54 | Chains: AO
ribosomal protein uL13 protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2260
95 % 30 68 919
90 % 30 68 947
70 % 30 68 961
50 % 88 172 282
40 % 88 173 292
30 % 88 173 318
Entity #55 | Chains: AP
ribosomal protein uL22 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 24 2427
95 % 17 33 2105
90 % 17 33 2157
70 % 17 33 2208
50 % 88 182 255
40 % 88 182 270
30 % 88 182 293
Entity #56 | Chains: AQ
ribosomal protein eL18 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2347
95 % 26 64 1005
90 % 30 68 957
70 % 30 68 991
50 % 87 173 293
40 % 87 178 287
30 % 87 178 310
Entity #57 | Chains: AR
ribosomal protein eL19 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 64 727
95 % 30 68 895
90 % 30 68 946
70 % 30 69 941
50 % 86 171 292
40 % 86 172 305
30 % 86 172 330
Entity #58 | Chains: AS
ribosomal protein eL20 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2335
95 % 26 58 1110
90 % 26 58 1141
70 % 30 62 1091
50 % 86 163 321
40 % 87 164 326
30 % 87 165 343
Entity #59 | Chains: AT
ribosomal protein eL21 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 67 680
95 % 30 68 907
90 % 30 68 943
70 % 30 69 954
50 % 87 162 320
40 % 87 168 321
30 % 89 175 312
Entity #6 | Chains: BD
ribosomal protein uS3 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 38 1144
95 % 29 67 845
90 % 29 67 876
70 % 29 68 893
50 % 74 153 327
40 % 74 153 342
30 % 74 153 360
Entity #60 | Chains: AU
ribosomal protein eL22 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 21 2967
95 % 17 29 2486
90 % 17 29 2545
70 % 17 29 2591
50 % 17 33 2274
40 % 33 55 1084
30 % 33 56 1104
Entity #61 | Chains: AV
Ribosomal protein L23 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 68 675
95 % 30 68 914
90 % 30 68 950
70 % 89 184 235
50 % 89 185 248
40 % 89 185 261
30 % 89 185 284
Entity #62 | Chains: AW
ribosomal protein eL24 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 7080
95 % 9 11 7750
90 % 9 11 7711
70 % 9 11 7532
50 % 9 11 7087
40 % 9 11 6846
30 % 9 11 6416
Entity #63 | Chains: AX
ribosomal protein uL23 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 28 2034
95 % 17 28 2635
90 % 17 28 2697
70 % 17 29 2561
50 % 33 52 1099
40 % 33 52 1125
30 % 33 52 1161
Entity #64 | Chains: AY
Ribosomal protein L26 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 68 668
95 % 30 68 890
90 % 30 68 923
70 % 3 6 14978
50 % 88 182 253
40 % 88 182 268
30 % 88 182 291
Entity #65 | Chains: AZ
60S ribosomal protein L27 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 67 687
95 % 30 67 934
90 % 30 67 970
70 % 30 67 1007
50 % 86 158 328
40 % 87 171 306
30 % 88 173 322
Entity #66 | Chains: Aa
ribosomal protein uL15 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2349
95 % 30 68 909
90 % 30 68 945
70 % 30 69 947
50 % 88 175 274
40 % 89 176 285
30 % 89 178 306
Entity #67 | Chains: Ab
ribosomal protein eL29 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 15646
95 % 2 13 6324
90 % 2 13 6338
70 % 2 13 6242
50 % 2 13 5968
40 % 2 13 5809
30 % 2 13 5543
Entity #68 | Chains: Ac
ribosomal protein eL30 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 21 2903
95 % 17 28 2657
90 % 17 28 2581
70 % 31 74 879
50 % 91 181 254
40 % 91 181 269
30 % 91 181 292
Entity #69 | Chains: Ad
ribosomal protein eL31 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 28 2015
95 % 17 28 2579
90 % 17 28 2639
70 % 17 28 2621
50 % 88 172 283
40 % 88 172 296
30 % 88 172 324
Entity #7 | Chains: BF
Ribosomal protein S5 protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 78 503
95 % 35 78 693
90 % 35 78 725
70 % 42 93 633
50 % 87 183 235
40 % 87 183 245
30 % 87 183 263
Entity #70 | Chains: Ae
ribosomal protein eL32 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 68 654
95 % 30 68 885
90 % 30 68 915
70 % 30 69 940
50 % 89 176 269
40 % 89 180 276
30 % 89 181 295
Entity #71 | Chains: Af
ribosomal protein eL33 protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 33 1622
95 % 30 67 926
90 % 30 67 975
70 % 30 67 1000
50 % 86 168 307
40 % 87 170 318
30 % 87 170 339
Entity #72 | Chains: Ag
ribosomal protein eL34 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 67 678
95 % 30 67 922
90 % 30 67 962
70 % 30 67 998
50 % 86 157 332
40 % 86 157 346
30 % 86 157 363
Entity #73 | Chains: Ah
ribosomal protein uL29 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 26 2169
95 % 30 68 903
90 % 30 68 936
70 % 30 68 977
50 % 87 174 289
40 % 88 185 258
30 % 89 187 272
Entity #74 | Chains: Ai
ribosomal protein eL36 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 33 1592
95 % 30 67 931
90 % 30 67 967
70 % 30 67 1008
50 % 30 69 989
40 % 87 165 322
30 % 87 175 315
Entity #75 | Chains: Aj
Ribosomal protein L37 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 25 2287
95 % 17 32 2199
90 % 17 32 2252
70 % 17 34 2140
50 % 88 180 259
40 % 88 180 277
30 % 88 180 299
Entity #76 | Chains: Ak
ribosomal protein eL38 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 63 740
95 % 30 67 925
90 % 30 67 963
70 % 30 70 928
50 % 30 70 971
40 % 30 70 1011
30 % 30 70 1052
Entity #77 | Chains: Al
ribosomal protein eL39 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 41 1213
95 % 30 68 902
90 % 30 68 935
70 % 87 164 269
50 % 88 176 271
40 % 88 178 282
30 % 89 179 301
Entity #78 | Chains: Am
ribosomal protein eL40 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 35 1490
95 % 21 35 1953
90 % 21 36 1916
70 % 62 91 449
50 % 62 91 488
40 % 62 91 520
30 % 62 91 545
Entity #79 | Chains: An
ribosomal protein eL41 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 72 567
95 % 33 75 731
90 % 33 75 761
70 % 74 147 290
50 % 74 147 340
40 % 74 147 355
30 % 74 147 374
Entity #8 | Chains: BK
ribosomal protein eS10 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 26 2186
95 % 17 26 2827
90 % 17 26 2874
70 % 17 26 2958
50 % 17 27 2826
40 % 17 27 2835
30 % 17 27 2798
Entity #80 | Chains: Ao
ribosomal protein eL42 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 68 657
95 % 30 68 912
90 % 30 68 922
70 % 87 159 278
50 % 89 171 290
40 % 88 171 302
30 % 89 172 323
Entity #81 | Chains: Ap
ribosomal protein eL43 protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 68 676
95 % 30 68 892
90 % 30 68 920
70 % 30 71 916
50 % 88 171 285
40 % 89 172 295
30 % 111 195 249
Entity #82 | Chains: At
ribosomal protein eL28 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2263
95 % 30 67 921
90 % 30 67 965
70 % 30 67 1003
50 % 30 67 1033
40 % 30 68 1063
30 % 30 70 1049
Entity #83 | Chains: Au
Ribosomal protein protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 27 2126
95 % 16 27 2695
90 % 16 27 2733
70 % 16 28 2672
50 % 20 59 1148
40 % 20 59 1187
30 % 20 59 1224
Entity #84 | Chains: Aq
Ribosomal protein L12 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 38 1361
95 % 13 38 1794
90 % 13 38 1831
70 % 18 56 1225
50 % 23 66 1047
40 % 23 66 1090
30 % 23 66 1126
Entity #85 | Chains: AK
ribosomal protein uL10 protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 12765
95 % 7 20 3941
90 % 7 20 4017
70 % 7 20 3994
50 % 10 27 2838
40 % 16 36 2041
30 % 16 36 2063
Entity #86 | Chains: Ct
eukaryotic elongation factor 2 (eEF2) protein, length: 853 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 35844
95 % 3 8 11873
90 % 3 8 11725
70 % 3 9 9499
50 % 16 37 1273
40 % 16 37 1327
30 % 16 37 1354
Entity #9 | Chains: BM
40S ribosomal protein S12 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 58 730
95 % 30 70 795
90 % 30 70 826
70 % 35 75 787
50 % 35 76 825
40 % 35 76 863
30 % 35 76 897

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures