6GZ3

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)


Sequence Similarity Clusters for the Entities in PDB 6GZ3

Entity #1 | Chains: A2
28S ribosomal RNA rna, length: 3612 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: BP
ribosomal protein uS19 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 13 6018
95 % 59 100 616
90 % 59 100 643
70 % 59 102 642
50 % 119 200 283
40 % 126 211 267
30 % 126 211 280
Entity #11 | Chains: BQ
ribosomal protein uS9 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 92 512
95 % 51 92 665
90 % 51 92 692
70 % 51 95 697
50 % 126 219 241
40 % 126 219 243
30 % 134 231 240
Entity #12 | Chains: BR
ribosomal protein eS17 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 74 646
95 % 62 104 555
90 % 62 104 578
70 % 62 105 599
50 % 122 200 280
40 % 122 200 287
30 % 122 200 300
Entity #13 | Chains: BS
ribosomal protein uS13 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 59 102 452
95 % 59 102 592
90 % 59 102 617
70 % 126 207 244
50 % 129 216 245
40 % 136 228 233
30 % 137 229 243
Entity #14 | Chains: BT
ribosomal protein eS19 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 59 812
95 % 59 101 614
90 % 59 101 635
70 % 59 101 656
50 % 59 103 655
40 % 118 195 302
30 % 120 198 296
Entity #15 | Chains: BU
ribosomal protein uS10 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 27 2342
95 % 20 29 2701
90 % 20 29 2768
70 % 20 29 2796
50 % 20 32 2568
40 % 27 43 1875
30 % 495 670 32
Entity #16 | Chains: BZ
ribosomal protein eS25 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 21279
95 % 3 5 19047
90 % 3 5 18842
70 % 3 5 17469
50 % 7 9 9426
40 % 7 9 9122
30 % 7 9 8508
Entity #17 | Chains: Bc
Ribosomal protein S28 protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 18 4150
95 % 14 18 4845
90 % 14 21 4121
70 % 132 220 233
50 % 141 234 223
40 % 142 235 226
30 % 142 235 232
Entity #18 | Chains: Bd
ribosomal protein uS14 protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 59 95 498
95 % 59 99 620
90 % 59 99 648
70 % 117 190 266
50 % 118 198 285
40 % 118 198 294
30 % 118 198 307
Entity #19 | Chains: Bf
Ribosomal protein S27a protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 29 2137
95 % 24 36 2031
90 % 24 36 2096
70 % 67 83 603
50 % 67 87 612
40 % 67 87 657
30 % 67 87 680
Entity #2 | Chains: Bv
ap/P-site tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: Bg
ribosomal protein RACK 1 protein, length: 314 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 101 445
95 % 60 101 567
90 % 60 101 590
70 % 61 103 595
50 % 122 197 268
40 % 124 203 256
30 % 124 204 267
Entity #21 | Chains: BA
ribosomal protein uS2 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 23 3030
95 % 22 32 2462
90 % 22 32 2479
70 % 22 32 2577
50 % 40 65 985
40 % 83 140 398
30 % 83 140 410
Entity #22 | Chains: BB
40S ribosomal protein S3a protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 23 2991
95 % 19 28 2781
90 % 19 28 2848
70 % 19 28 2966
50 % 19 31 2662
40 % 19 31 2652
30 % 19 31 2655
Entity #23 | Chains: BC
ribosomal protein uS5 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 17 4245
95 % 22 34 2195
90 % 22 34 2322
70 % 22 37 2128
50 % 40 65 975
40 % 40 65 999
30 % 40 65 1046
Entity #24 | Chains: BE
ribosomal protein eS4 protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 6977
95 % 3 12 7793
90 % 59 101 624
70 % 128 210 242
50 % 131 220 239
40 % 131 220 241
30 % 138 231 241
Entity #25 | Chains: BG
40S ribosomal protein S6 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 59 100 469
95 % 59 101 610
90 % 59 101 630
70 % 63 107 583
50 % 129 211 261
40 % 129 216 259
30 % 129 216 271
Entity #26 | Chains: BH
40S ribosomal protein S7 protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 59 101 463
95 % 60 102 595
90 % 60 102 619
70 % 60 103 622
50 % 131 217 250
40 % 131 217 252
30 % 133 220 254
Entity #27 | Chains: BI
ribosomal protein eS8 protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 53 93 510
95 % 59 101 612
90 % 59 101 639
70 % 59 101 659
50 % 131 219 244
40 % 131 223 239
30 % 131 223 253
Entity #28 | Chains: BJ
Ribosomal protein S9 (Predicted) protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 59 101 464
95 % 59 101 602
90 % 59 101 623
70 % 131 214 240
50 % 134 229 229
40 % 141 240 220
30 % 141 240 227
Entity #29 | Chains: BL
Ribosomal protein S11 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 59 102 460
95 % 59 102 594
90 % 59 102 615
70 % 59 103 621
50 % 132 226 232
40 % 132 226 235
30 % 132 226 246
Entity #3 | Chains: Bx
mRNA rna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #30 | Chains: BN
ribosomal protein uS15 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 102 454
95 % 60 102 596
90 % 60 102 620
70 % 132 219 236
50 % 134 226 233
40 % 142 238 224
30 % 142 238 230
Entity #31 | Chains: BO
ribosomal protein uS11 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 55 90 522
95 % 55 90 676
90 % 61 98 655
70 % 134 227 225
50 % 134 228 230
40 % 134 228 232
30 % 134 228 244
Entity #32 | Chains: BV
ribosomal protein eS21 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 82 578
95 % 60 101 608
90 % 60 101 632
70 % 60 102 639
50 % 117 193 297
40 % 117 193 310
30 % 117 193 320
Entity #33 | Chains: BW
Ribosomal protein S15a protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 59 102 451
95 % 59 102 590
90 % 59 102 614
70 % 132 229 227
50 % 134 231 228
40 % 142 243 215
30 % 612 881 22
Entity #34 | Chains: BX
Ribosomal protein S23 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 59 100 470
95 % 59 104 566
90 % 59 105 577
70 % 134 233 218
50 % 142 246 211
40 % 142 246 214
30 % 142 246 223
Entity #35 | Chains: BY
ribosomal protein eS24 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 53 93 505
95 % 59 101 605
90 % 59 101 631
70 % 59 102 641
50 % 129 221 246
40 % 129 221 246
30 % 129 221 259
Entity #36 | Chains: Ba
ribosomal protein eS26 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 30 2118
95 % 22 34 2273
90 % 22 34 2339
70 % 22 34 2400
50 % 65 90 548
40 % 65 90 586
30 % 65 90 614
Entity #37 | Chains: Bb
ribosomal protein eS27 protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 102 458
95 % 60 102 591
90 % 60 102 616
70 % 125 209 243
50 % 127 215 248
40 % 127 215 248
30 % 127 215 262
Entity #38 | Chains: Be
ribosomal protein eS30 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 54 991
95 % 30 54 1341
90 % 40 69 1032
70 % 40 71 1046
50 % 115 189 342
40 % 115 189 353
30 % 115 189 368
Entity #39 | Chains: A3
5.8S ribosomal RNA rna, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: Bw
pe/E-site-tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #40 | Chains: A4
5S ribosomal RNA rna, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #41 | Chains: AA
Ribosomal protein L8 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 84 609
95 % 46 84 807
90 % 46 84 840
70 % 120 194 267
50 % 121 207 267
40 % 192 281 193
30 % 192 281 205
Entity #42 | Chains: AB
ribosomal protein uL3 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 41 1372
95 % 46 84 800
90 % 46 84 832
70 % 46 85 842
50 % 124 219 249
40 % 124 219 250
30 % 124 221 260
Entity #43 | Chains: AC
ribosomal protein uL4 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 7091
95 % 22 40 1864
90 % 22 40 1911
70 % 22 40 1964
50 % 98 166 343
40 % 123 219 251
30 % 123 219 264
Entity #44 | Chains: AD
ribosomal protein uL18 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 41 1380
95 % 46 84 803
90 % 46 84 833
70 % 46 84 861
50 % 120 202 282
40 % 121 204 284
30 % 121 204 297
Entity #45 | Chains: AE
ribosomal protein eL6 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 23702
95 % 2 4 25507
90 % 2 4 24668
70 % 2 4 22530
50 % 2 4 19853
40 % 78 120 453
30 % 78 120 469
Entity #46 | Chains: AF
ribosomal protein uL30 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 48 1130
95 % 46 84 781
90 % 46 84 827
70 % 46 84 856
50 % 122 206 273
40 % 122 206 280
30 % 122 205 295
Entity #47 | Chains: AG
ribosomal protein eL8 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 10 8303
95 % 35 65 1076
90 % 35 65 1118
70 % 35 65 1155
50 % 115 190 309
40 % 115 192 316
30 % 115 192 333
Entity #48 | Chains: AH
ribosomal protein uL6 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 50 1094
95 % 46 84 806
90 % 46 84 838
70 % 46 84 865
50 % 122 214 260
40 % 123 216 255
30 % 194 290 198
Entity #49 | Chains: AI
Ribosomal protein L10 (Predicted) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 15 5257
95 % 27 52 1375
90 % 43 81 875
70 % 44 93 759
50 % 108 189 305
40 % 108 189 315
30 % 108 189 330
Entity #5 | Chains: B1
18S ribosomal RNA rna, length: 1708 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #50 | Chains: AJ
Ribosomal protein L11 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 47 77 657
95 % 47 85 777
90 % 47 85 808
70 % 121 205 252
50 % 123 209 263
40 % 123 209 270
30 % 123 209 284
Entity #51 | Chains: AL
ribosomal protein eL13 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 41 1371
95 % 46 83 818
90 % 46 83 855
70 % 46 83 877
50 % 46 85 869
40 % 121 204 289
30 % 121 204 302
Entity #52 | Chains: AM
ribosomal protein eL14 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 6472
95 % 18 26 3084
90 % 18 29 2760
70 % 18 29 2792
50 % 18 29 2817
40 % 18 30 2778
30 % 18 30 2712
Entity #53 | Chains: AN
Ribosomal protein L15 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 84 605
95 % 46 84 784
90 % 46 84 822
70 % 122 204 255
50 % 124 218 251
40 % 124 218 254
30 % 194 291 199
Entity #54 | Chains: AO
ribosomal protein uL13 protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 41 1395
95 % 46 84 799
90 % 46 84 831
70 % 46 84 859
50 % 122 206 272
40 % 122 207 275
30 % 122 207 289
Entity #55 | Chains: AP
ribosomal protein uL22 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 25 2548
95 % 18 34 2221
90 % 18 34 2270
70 % 18 34 2326
50 % 122 216 253
40 % 122 216 258
30 % 122 216 270
Entity #56 | Chains: AQ
ribosomal protein eL18 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 41 1397
95 % 42 80 860
90 % 46 84 839
70 % 46 84 866
50 % 121 207 278
40 % 121 212 271
30 % 121 212 286
Entity #57 | Chains: AR
ribosomal protein eL19 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 43 81 624
95 % 47 85 772
90 % 47 85 802
70 % 47 86 828
50 % 121 206 275
40 % 121 207 279
30 % 121 207 293
Entity #58 | Chains: AS
ribosomal protein eL20 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 41 1363
95 % 42 74 925
90 % 42 74 966
70 % 46 78 938
50 % 120 197 298
40 % 121 198 299
30 % 121 199 311
Entity #59 | Chains: AT
ribosomal protein eL21 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 83 612
95 % 46 84 808
90 % 46 84 841
70 % 46 85 846
50 % 121 196 299
40 % 121 202 296
30 % 123 209 283
Entity #6 | Chains: BD
ribosomal protein uS3 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 57 840
95 % 51 89 691
90 % 51 89 720
70 % 51 90 737
50 % 110 189 302
40 % 110 189 312
30 % 110 189 325
Entity #60 | Chains: AU
ribosomal protein eL22 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 22 3102
95 % 18 30 2663
90 % 18 30 2739
70 % 18 30 2697
50 % 18 34 2368
40 % 38 60 1084
30 % 38 61 1107
Entity #61 | Chains: AV
Ribosomal protein L23 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 84 604
95 % 46 84 794
90 % 46 84 825
70 % 123 218 238
50 % 126 224 243
40 % 126 224 245
30 % 129 231 247
Entity #62 | Chains: AW
ribosomal protein eL24 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 6853
95 % 10 12 8088
90 % 10 12 8065
70 % 10 12 7869
50 % 21 23 3088
40 % 21 23 3068
30 % 21 23 3050
Entity #63 | Chains: AX
ribosomal protein uL23 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 29 2156
95 % 18 29 2734
90 % 18 29 2802
70 % 18 30 2760
50 % 38 57 1115
40 % 38 57 1146
30 % 38 57 1195
Entity #64 | Chains: AY
Ribosomal protein L26 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 47 85 594
95 % 47 85 780
90 % 47 85 811
70 % 3 6 16323
50 % 123 214 258
40 % 123 214 265
30 % 123 214 278
Entity #65 | Chains: AZ
60S ribosomal protein L27 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 83 610
95 % 46 83 814
90 % 46 83 851
70 % 46 83 869
50 % 120 192 306
40 % 121 205 283
30 % 122 207 292
Entity #66 | Chains: Aa
ribosomal protein uL15 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 41 1382
95 % 46 84 785
90 % 46 84 814
70 % 46 85 839
50 % 122 209 265
40 % 123 210 269
30 % 126 215 274
Entity #67 | Chains: Ab
ribosomal protein eL29 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 16865
95 % 2 13 6954
90 % 2 13 6976
70 % 2 13 7003
50 % 2 13 6703
40 % 2 13 6497
30 % 2 13 6191
Entity #68 | Chains: Ac
ribosomal protein eL30 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 22 3120
95 % 18 29 2719
90 % 18 29 2743
70 % 47 90 780
50 % 125 215 252
40 % 125 215 257
30 % 125 215 269
Entity #69 | Chains: Ad
ribosomal protein eL31 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 29 2140
95 % 18 29 2735
90 % 18 29 2780
70 % 18 29 2798
50 % 122 206 271
40 % 122 206 277
30 % 122 206 291
Entity #7 | Chains: BF
Ribosomal protein S5 protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 59 102 450
95 % 59 102 588
90 % 59 102 612
70 % 66 117 536
50 % 134 230 227
40 % 134 230 231
30 % 134 230 242
Entity #70 | Chains: Ae
ribosomal protein eL32 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 84 600
95 % 46 84 796
90 % 46 84 828
70 % 46 85 845
50 % 123 210 262
40 % 123 214 264
30 % 123 215 272
Entity #71 | Chains: Af
ribosomal protein eL33 protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 49 1123
95 % 46 83 821
90 % 46 83 857
70 % 46 83 880
50 % 120 202 288
40 % 121 204 292
30 % 122 205 305
Entity #72 | Chains: Ag
ribosomal protein eL34 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 83 613
95 % 46 83 816
90 % 46 83 850
70 % 46 83 872
50 % 120 191 308
40 % 120 191 318
30 % 120 191 336
Entity #73 | Chains: Ah
ribosomal protein uL29 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 43 1292
95 % 47 85 774
90 % 47 85 804
70 % 47 85 838
50 % 122 209 269
40 % 123 220 249
30 % 124 222 257
Entity #74 | Chains: Ai
ribosomal protein eL36 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 49 1110
95 % 46 83 810
90 % 46 83 847
70 % 46 83 875
50 % 46 85 866
40 % 121 199 297
30 % 121 209 287
Entity #75 | Chains: Aj
Ribosomal protein L37 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 26 2417
95 % 18 33 2287
90 % 18 33 2351
70 % 18 33 2412
50 % 122 214 255
40 % 122 214 263
30 % 122 214 275
Entity #76 | Chains: Ak
ribosomal protein eL38 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 43 80 636
95 % 47 84 787
90 % 47 84 817
70 % 47 87 824
50 % 47 87 853
40 % 47 87 874
30 % 47 87 912
Entity #77 | Chains: Al
ribosomal protein eL39 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 57 951
95 % 46 84 797
90 % 46 84 829
70 % 121 198 264
50 % 125 215 254
40 % 125 215 260
30 % 126 216 268
Entity #78 | Chains: Am
ribosomal protein eL40 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 36 1605
95 % 22 36 2114
90 % 22 37 2057
70 % 67 96 488
50 % 67 96 522
40 % 67 96 560
30 % 67 96 589
Entity #79 | Chains: An
ribosomal protein eL41 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 54 93 509
95 % 54 96 642
90 % 54 96 669
70 % 108 181 280
50 % 108 181 318
40 % 108 181 329
30 % 108 181 347
Entity #8 | Chains: BK
ribosomal protein eS10 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 31 1964
95 % 22 31 2535
90 % 22 31 2594
70 % 22 31 2644
50 % 22 32 2605
40 % 22 32 2598
30 % 22 32 2596
Entity #80 | Chains: Ao
ribosomal protein eL42 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 84 595
95 % 46 84 789
90 % 46 84 818
70 % 116 185 279
50 % 118 197 289
40 % 117 197 301
30 % 118 198 312
Entity #81 | Chains: Ap
ribosomal protein eL43 protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 46 84 606
95 % 46 84 802
90 % 46 84 820
70 % 46 87 820
50 % 121 204 276
40 % 122 205 281
30 % 144 228 252
Entity #82 | Chains: At
ribosomal protein eL28 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 41 1381
95 % 46 83 820
90 % 46 83 856
70 % 46 83 879
50 % 46 83 902
40 % 46 84 906
30 % 46 86 926
Entity #83 | Chains: Au
Ribosomal protein protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 38 1514
95 % 27 38 1913
90 % 27 38 1960
70 % 27 39 1973
50 % 36 75 989
40 % 36 75 1012
30 % 36 75 1058
Entity #84 | Chains: Aq
Ribosomal protein L12 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 42 1359
95 % 17 42 1771
90 % 17 42 1806
70 % 25 63 1187
50 % 30 73 1035
40 % 30 73 1060
30 % 30 73 1106
Entity #85 | Chains: AK
ribosomal protein uL10 protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 13687
95 % 7 20 4232
90 % 7 20 4423
70 % 7 20 4259
50 % 10 27 3082
40 % 16 36 2268
30 % 16 36 2289
Entity #86 | Chains: Ct
eukaryotic elongation factor 2 (eEF2) protein, length: 853 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 33341
95 % 5 10 9832
90 % 5 10 9735
70 % 5 11 8447
50 % 18 39 1371
40 % 18 39 1407
30 % 18 39 1433
Entity #9 | Chains: BM
40S ribosomal protein S12 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 48 79 597
95 % 53 93 655
90 % 53 93 685
70 % 58 98 679
50 % 58 99 700
40 % 58 99 726
30 % 58 99 765

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures