6GZ3

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)


Sequence Similarity Clusters for the Entities in PDB 6GZ3

Entity #1 | Chains: A2
28S ribosomal RNA rna, length: 3612 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: BP
ribosomal protein uS19 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 6767
95 % 17 24 3010
90 % 17 24 2951
70 % 17 24 2983
50 % 72 152 315
40 % 73 157 314
30 % 73 157 333
Entity #11 | Chains: BQ
ribosomal protein uS9 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 69 561
95 % 28 69 747
90 % 28 69 786
70 % 28 72 784
50 % 73 165 256
40 % 73 169 261
30 % 74 170 278
Entity #12 | Chains: BR
ribosomal protein eS17 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 44 1071
95 % 28 70 739
90 % 28 70 780
70 % 28 71 800
50 % 72 149 317
40 % 72 149 334
30 % 72 149 347
Entity #13 | Chains: BS
ribosomal protein uS13 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 71 530
95 % 28 71 719
90 % 28 71 766
70 % 70 148 270
50 % 73 159 273
40 % 74 165 275
30 % 74 165 295
Entity #14 | Chains: BT
ribosomal protein eS19 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 40 1042
95 % 28 70 745
90 % 28 70 783
70 % 28 70 810
50 % 28 72 824
40 % 28 72 864
30 % 30 75 826
Entity #15 | Chains: BU
ribosomal protein uS10 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 24 2351
95 % 17 26 2660
90 % 17 26 2737
70 % 17 26 2770
50 % 17 29 2498
40 % 17 33 2206
30 % 383 557 31
Entity #16 | Chains: BZ
ribosomal protein eS25 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 18809
95 % 3 5 17330
90 % 3 5 16460
70 % 3 5 15444
50 % 3 5 13885
40 % 3 5 12895
30 % 3 5 11746
Entity #17 | Chains: Bc
Ribosomal protein S28 protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 15 4599
95 % 11 15 5399
90 % 11 18 4209
70 % 71 158 250
50 % 73 165 257
40 % 74 166 271
30 % 74 166 290
Entity #18 | Chains: Bd
ribosomal protein uS14 protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 64 604
95 % 28 68 770
90 % 28 68 809
70 % 70 141 282
50 % 73 152 298
40 % 73 152 318
30 % 73 152 335
Entity #19 | Chains: Bf
Ribosomal protein S27a protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 25 2209
95 % 17 29 2378
90 % 17 29 2442
70 % 55 71 585
50 % 55 74 588
40 % 55 74 624
30 % 55 74 655
Entity #2 | Chains: Bv
ap/P-site tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: Bg
ribosomal protein RACK 1 protein, length: 314 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 70 516
95 % 29 70 709
90 % 29 70 747
70 % 30 72 753
50 % 76 150 296
40 % 78 156 281
30 % 78 157 301
Entity #21 | Chains: BA
ribosomal protein uS2 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 18 3491
95 % 17 27 2594
90 % 17 27 2661
70 % 17 27 2688
50 % 30 54 1000
40 % 62 118 403
30 % 62 118 417
Entity #22 | Chains: BB
40S ribosomal protein S3a protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 22 2690
95 % 17 26 2639
90 % 17 26 2712
70 % 17 26 2742
50 % 17 29 2497
40 % 17 29 2540
30 % 17 33 2219
Entity #23 | Chains: BC
ribosomal protein uS5 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 15 4296
95 % 17 29 2383
90 % 17 29 2447
70 % 17 32 2256
50 % 30 54 992
40 % 30 54 1038
30 % 30 54 1074
Entity #24 | Chains: BE
ribosomal protein eS4 protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 6595
95 % 3 12 7300
90 % 28 70 774
70 % 69 150 268
50 % 72 164 264
40 % 72 164 282
30 % 73 169 287
Entity #25 | Chains: BG
40S ribosomal protein S6 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 69 555
95 % 28 70 741
90 % 28 70 782
70 % 28 72 789
50 % 70 151 324
40 % 70 156 324
30 % 70 156 339
Entity #26 | Chains: BH
40S ribosomal protein S7 protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 69 560
95 % 28 70 742
90 % 28 70 775
70 % 28 71 797
50 % 70 155 304
40 % 70 155 325
30 % 72 158 319
Entity #27 | Chains: BI
ribosomal protein eS8 protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 65 590
95 % 28 70 735
90 % 28 70 773
70 % 28 70 809
50 % 72 158 283
40 % 72 163 283
30 % 72 163 303
Entity #28 | Chains: BJ
Ribosomal protein S9 (Predicted) protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 70 542
95 % 28 70 734
90 % 28 70 772
70 % 70 152 265
50 % 73 167 252
40 % 73 171 254
30 % 73 171 272
Entity #29 | Chains: BL
Ribosomal protein S11 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 71 522
95 % 28 71 726
90 % 28 71 765
70 % 28 72 787
50 % 73 166 253
40 % 73 166 269
30 % 73 166 291
Entity #3 | Chains: Bx
mRNA rna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #30 | Chains: BN
ribosomal protein uS15 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 70 534
95 % 28 70 733
90 % 28 70 770
70 % 71 157 252
50 % 73 164 262
40 % 74 169 263
30 % 74 169 280
Entity #31 | Chains: BO
ribosomal protein uS11 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 59 671
95 % 24 59 914
90 % 24 61 922
70 % 66 144 274
50 % 73 166 254
40 % 73 166 272
30 % 73 166 292
Entity #32 | Chains: BV
ribosomal protein eS21 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 61 652
95 % 28 69 749
90 % 28 69 792
70 % 28 70 807
50 % 69 144 331
40 % 69 144 348
30 % 69 144 361
Entity #33 | Chains: BW
Ribosomal protein S15a protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 71 526
95 % 28 71 721
90 % 28 71 760
70 % 72 166 245
50 % 75 175 234
40 % 76 176 246
30 % 76 176 264
Entity #34 | Chains: BX
Ribosomal protein S23 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 69 548
95 % 28 73 704
90 % 28 74 722
70 % 73 171 231
50 % 74 177 230
40 % 74 177 245
30 % 74 177 262
Entity #35 | Chains: BY
ribosomal protein eS24 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 65 600
95 % 28 70 744
90 % 28 70 784
70 % 28 71 802
50 % 70 161 290
40 % 70 161 305
30 % 70 161 323
Entity #36 | Chains: Ba
ribosomal protein eS26 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 26 2063
95 % 17 29 2344
90 % 17 29 2411
70 % 17 29 2452
50 % 55 79 514
40 % 55 79 552
30 % 55 79 579
Entity #37 | Chains: Bb
ribosomal protein eS27 protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 70 543
95 % 28 70 738
90 % 28 70 779
70 % 69 147 273
50 % 72 159 276
40 % 72 159 294
30 % 72 159 312
Entity #38 | Chains: Be
ribosomal protein eS30 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 36 1402
95 % 12 36 1847
90 % 20 49 1330
70 % 20 51 1312
50 % 81 154 358
40 % 81 154 375
30 % 81 154 388
Entity #39 | Chains: A3
5.8S ribosomal RNA rna, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: Bw
pe/E-site-tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #40 | Chains: A4
5S ribosomal RNA rna, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #41 | Chains: AA
Ribosomal protein L8 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 62 693
95 % 24 62 946
90 % 24 62 983
70 % 79 153 269
50 % 80 166 271
40 % 148 237 197
30 % 148 237 205
Entity #42 | Chains: AB
ribosomal protein uL3 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2227
95 % 24 62 965
90 % 24 62 1005
70 % 24 63 1005
50 % 82 177 238
40 % 82 177 251
30 % 82 179 268
Entity #43 | Chains: AC
ribosomal protein uL4 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 6821
95 % 17 35 1868
90 % 17 35 1912
70 % 17 35 1962
50 % 73 141 338
40 % 81 177 255
30 % 81 177 274
Entity #44 | Chains: AD
ribosomal protein uL18 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2229
95 % 24 62 966
90 % 24 62 1006
70 % 24 62 1030
50 % 80 162 289
40 % 81 164 293
30 % 81 164 311
Entity #45 | Chains: AE
ribosomal protein eL6 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 26318
95 % 2 4 22828
90 % 2 4 19846
70 % 2 4 20334
50 % 2 4 17998
40 % 58 100 448
30 % 58 100 470
Entity #46 | Chains: AF
ribosomal protein uL30 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 32 1581
95 % 24 62 960
90 % 24 62 984
70 % 24 62 1026
50 % 80 165 275
40 % 80 165 292
30 % 80 164 318
Entity #47 | Chains: AG
ribosomal protein eL8 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 10 7521
95 % 15 45 1428
90 % 15 45 1453
70 % 15 45 1486
50 % 75 150 328
40 % 75 152 342
30 % 75 152 355
Entity #48 | Chains: AH
ribosomal protein uL6 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 34 1472
95 % 24 62 959
90 % 24 62 995
70 % 24 62 1025
50 % 80 172 265
40 % 81 174 268
30 % 149 245 202
Entity #49 | Chains: AI
Ribosomal protein L10 (Predicted) protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 14 5054
95 % 24 62 957
90 % 24 62 997
70 % 24 70 887
50 % 74 155 309
40 % 74 155 327
30 % 74 155 343
Entity #5 | Chains: B1
18S ribosomal RNA rna, length: 1708 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #50 | Chains: AJ
Ribosomal protein L11 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 55 832
95 % 25 63 938
90 % 25 63 975
70 % 81 165 248
50 % 83 169 263
40 % 83 169 280
30 % 83 169 302
Entity #51 | Chains: AL
ribosomal protein eL13 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2228
95 % 24 61 984
90 % 24 61 1022
70 % 24 61 1048
50 % 24 63 1057
40 % 79 162 308
30 % 79 162 327
Entity #52 | Chains: AM
ribosomal protein eL14 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 6889
95 % 17 25 2784
90 % 17 28 2532
70 % 17 28 2557
50 % 17 28 2568
40 % 17 29 2519
30 % 17 29 2487
Entity #53 | Chains: AN
Ribosomal protein L15 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 62 697
95 % 24 62 956
90 % 24 62 992
70 % 80 162 253
50 % 82 176 245
40 % 82 176 262
30 % 82 176 281
Entity #54 | Chains: AO
ribosomal protein uL13 protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2226
95 % 24 62 952
90 % 24 62 1000
70 % 24 62 1028
50 % 80 164 277
40 % 80 165 290
30 % 80 165 309
Entity #55 | Chains: AP
ribosomal protein uL22 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 24 2436
95 % 17 33 2020
90 % 17 33 2071
70 % 17 33 2127
50 % 80 174 249
40 % 80 174 267
30 % 80 174 285
Entity #56 | Chains: AQ
ribosomal protein eL18 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2162
95 % 24 62 964
90 % 24 62 1004
70 % 24 63 1014
50 % 79 165 287
40 % 79 170 288
30 % 79 170 305
Entity #57 | Chains: AR
ribosomal protein eL19 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 62 709
95 % 24 62 970
90 % 24 62 1011
70 % 24 63 1018
50 % 79 164 280
40 % 79 165 298
30 % 79 165 317
Entity #58 | Chains: AS
ribosomal protein eL20 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2181
95 % 24 56 1089
90 % 24 56 1120
70 % 24 56 1149
50 % 78 155 325
40 % 79 156 328
30 % 79 157 342
Entity #59 | Chains: AT
ribosomal protein eL21 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 61 712
95 % 24 62 954
90 % 24 62 990
70 % 24 63 1017
50 % 79 154 322
40 % 79 160 321
30 % 81 167 306
Entity #6 | Chains: BD
ribosomal protein uS3 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 38 1111
95 % 28 66 801
90 % 28 66 837
70 % 28 67 868
50 % 72 150 318
40 % 72 150 335
30 % 72 150 348
Entity #60 | Chains: AU
ribosomal protein eL22 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 21 2806
95 % 17 29 2387
90 % 17 29 2427
70 % 17 29 2486
50 % 17 33 2179
40 % 32 54 1042
30 % 32 55 1067
Entity #61 | Chains: AV
Ribosomal protein L23 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 62 708
95 % 24 62 949
90 % 24 62 999
70 % 81 176 235
50 % 81 177 240
40 % 81 177 256
30 % 81 177 275
Entity #62 | Chains: AW
ribosomal protein eL24 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 7105
95 % 9 11 7383
90 % 9 11 7373
70 % 9 11 7231
50 % 9 11 6824
40 % 9 11 6592
30 % 9 11 6189
Entity #63 | Chains: AX
ribosomal protein uL23 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 28 1908
95 % 17 28 2530
90 % 17 28 2527
70 % 17 29 2485
50 % 32 51 1061
40 % 32 51 1094
30 % 32 51 1134
Entity #64 | Chains: AY
Ribosomal protein L26 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 62 705
95 % 24 62 961
90 % 24 62 998
70 % 3 6 14479
50 % 80 171 259
40 % 80 171 276
30 % 80 171 298
Entity #65 | Chains: AZ
60S ribosomal protein L27 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 61 723
95 % 24 61 986
90 % 24 61 1030
70 % 24 61 1047
50 % 78 150 329
40 % 79 163 302
30 % 80 165 313
Entity #66 | Chains: Aa
ribosomal protein uL15 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2192
95 % 24 62 963
90 % 24 62 1003
70 % 24 64 989
50 % 80 167 269
40 % 81 168 286
30 % 81 170 300
Entity #67 | Chains: Ab
ribosomal protein eL29 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 13563
95 % 2 13 6082
90 % 2 13 6118
70 % 2 13 6040
50 % 2 13 5816
40 % 2 13 5652
30 % 2 13 5399
Entity #68 | Chains: Ac
ribosomal protein eL30 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 21 2760
95 % 17 28 2417
90 % 17 28 2481
70 % 25 68 933
50 % 75 134 351
40 % 75 134 370
30 % 75 134 381
Entity #69 | Chains: Ad
ribosomal protein eL31 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 28 1965
95 % 17 28 2448
90 % 17 28 2581
70 % 17 28 2542
50 % 80 164 278
40 % 80 164 297
30 % 80 164 316
Entity #7 | Chains: BF
Ribosomal protein S5 protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 71 531
95 % 28 71 730
90 % 28 71 758
70 % 29 80 688
50 % 73 168 250
40 % 73 168 264
30 % 73 168 284
Entity #70 | Chains: Ae
ribosomal protein eL32 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 62 694
95 % 24 62 950
90 % 24 62 986
70 % 24 63 1004
50 % 81 168 266
40 % 81 172 270
30 % 81 173 289
Entity #71 | Chains: Af
ribosomal protein eL33 protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 33 1497
95 % 24 61 991
90 % 24 61 1031
70 % 24 61 1055
50 % 78 160 306
40 % 79 162 316
30 % 79 162 334
Entity #72 | Chains: Ag
ribosomal protein eL34 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 61 719
95 % 24 61 980
90 % 24 61 1019
70 % 24 61 1044
50 % 78 149 332
40 % 78 149 349
30 % 78 149 362
Entity #73 | Chains: Ah
ribosomal protein uL29 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 26 2083
95 % 24 62 968
90 % 24 62 1007
70 % 24 62 1031
50 % 79 166 285
40 % 80 177 252
30 % 81 179 269
Entity #74 | Chains: Ai
ribosomal protein eL36 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 33 1533
95 % 24 61 993
90 % 24 61 1018
70 % 24 61 1052
50 % 24 63 1049
40 % 79 157 323
30 % 79 167 307
Entity #75 | Chains: Aj
Ribosomal protein L37 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 25 2175
95 % 17 32 2131
90 % 17 32 2194
70 % 17 32 2265
50 % 80 172 255
40 % 80 172 273
30 % 80 172 293
Entity #76 | Chains: Ak
ribosomal protein eL38 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 61 720
95 % 24 61 982
90 % 24 61 1021
70 % 24 64 993
50 % 24 64 1036
40 % 24 64 1079
30 % 24 64 1119
Entity #77 | Chains: Al
ribosomal protein eL39 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 41 1159
95 % 24 62 955
90 % 24 62 991
70 % 79 156 267
50 % 80 168 268
40 % 80 170 278
30 % 81 171 296
Entity #78 | Chains: Am
ribosomal protein eL40 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 31 1634
95 % 17 31 2163
90 % 17 32 2122
70 % 57 86 448
50 % 57 86 486
40 % 57 86 518
30 % 57 86 542
Entity #79 | Chains: An
ribosomal protein eL41 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 64 610
95 % 25 67 796
90 % 25 67 820
70 % 65 137 295
50 % 65 137 347
40 % 65 137 363
30 % 65 137 374
Entity #8 | Chains: BK
ribosomal protein eS10 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 26 2053
95 % 17 26 2632
90 % 17 26 2703
70 % 17 26 2737
50 % 17 27 2710
40 % 17 27 2731
30 % 17 27 2694
Entity #80 | Chains: Ao
ribosomal protein eL42 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 62 696
95 % 24 62 953
90 % 24 62 988
70 % 79 151 272
50 % 81 163 282
40 % 80 163 299
30 % 81 164 315
Entity #81 | Chains: Ap
ribosomal protein eL43 protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 62 700
95 % 24 62 958
90 % 24 62 993
70 % 24 65 969
50 % 80 163 281
40 % 81 164 295
30 % 103 187 253
Entity #82 | Chains: At
ribosomal protein eL28 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 25 2179
95 % 24 61 981
90 % 24 61 1020
70 % 24 61 1046
50 % 24 61 1084
40 % 24 62 1109
30 % 24 64 1112
Entity #83 | Chains: Au
Ribosomal protein protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 22 2730
95 % 11 22 3412
90 % 11 22 3486
70 % 11 23 3306
50 % 14 53 1230
40 % 14 53 1280
30 % 14 53 1315
Entity #84 | Chains: Aq
Ribosomal protein L12 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 36 1401
95 % 11 36 1846
90 % 11 36 1865
70 % 15 53 1245
50 % 20 63 1052
40 % 20 63 1092
30 % 20 63 1130
Entity #85 | Chains: AK
ribosomal protein uL10 protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 12032
95 % 7 20 3602
90 % 7 20 3852
70 % 7 20 3723
50 % 9 26 2816
40 % 15 35 2025
30 % 15 35 2047
Entity #86 | Chains: Ct
eukaryotic elongation factor 2 (eEF2) protein, length: 853 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 32951
95 % 3 8 11403
90 % 3 8 11315
70 % 3 9 9174
50 % 16 37 1222
40 % 16 37 1273
30 % 16 37 1301
Entity #9 | Chains: BM
40S ribosomal protein S12 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 51 817
95 % 23 63 856
90 % 23 63 897
70 % 28 68 849
50 % 28 69 870
40 % 28 69 920
30 % 28 69 955

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures