6GZ5

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)


Sequence Similarity Clusters for the Entities in PDB 6GZ5

Entity #1 | Chains: A2
28S ribosomal RNA rna, length: 3612 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: BP
ribosomal protein uS19 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 11 6981
95 % 19 24 3079
90 % 19 24 3046
70 % 19 24 3093
50 % 81 160 307
40 % 82 165 307
30 % 82 165 327
Entity #11 | Chains: BQ
ribosomal protein uS9 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 69 577
95 % 30 69 782
90 % 30 69 833
70 % 30 72 826
50 % 82 173 255
40 % 82 177 257
30 % 83 178 270
Entity #12 | Chains: BR
ribosomal protein eS17 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 51 834
95 % 36 76 689
90 % 36 76 731
70 % 36 77 748
50 % 81 157 308
40 % 81 157 324
30 % 81 157 342
Entity #13 | Chains: BS
ribosomal protein uS13 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 77 500
95 % 36 77 680
90 % 36 77 714
70 % 85 164 256
50 % 88 173 254
40 % 89 179 248
30 % 89 179 267
Entity #14 | Chains: BT
ribosomal protein eS19 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 40 1073
95 % 36 76 702
90 % 36 76 736
70 % 36 76 771
50 % 36 78 777
40 % 80 155 332
30 % 82 158 331
Entity #15 | Chains: BU
ribosomal protein uS10 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 24 2422
95 % 19 26 2736
90 % 19 26 2810
70 % 19 26 2875
50 % 19 29 2567
40 % 19 33 2254
30 % 399 571 31
Entity #16 | Chains: BZ
ribosomal protein eS25 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 17835
95 % 5 5 16932
90 % 5 5 17287
70 % 5 5 15565
50 % 5 5 14055
40 % 5 5 13570
30 % 5 5 12353
Entity #17 | Chains: Bc
ribosomal protein eS28 protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 15 4535
95 % 13 15 5381
90 % 13 18 4355
70 % 86 172 246
50 % 88 179 236
40 % 89 180 245
30 % 89 180 264
Entity #18 | Chains: Bd
ribosomal protein uS14 protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 70 567
95 % 36 74 727
90 % 36 74 762
70 % 79 150 278
50 % 80 158 310
40 % 80 158 326
30 % 80 158 344
Entity #19 | Chains: Bf
ribosomal protein eS31 protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 25 2265
95 % 19 29 2410
90 % 19 29 2469
70 % 57 71 620
50 % 57 75 620
40 % 57 75 653
30 % 57 75 685
Entity #2 | Chains: Bv
P/P-site-tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: Bg
ribosomal protein RACK 1 protein, length: 314 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 76 495
95 % 37 76 668
90 % 37 76 699
70 % 38 78 714
50 % 85 158 290
40 % 87 164 276
30 % 87 165 296
Entity #21 | Chains: BA
ribosomal protein uS2 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 18 3452
95 % 19 27 2635
90 % 19 27 2693
70 % 19 27 2788
50 % 32 55 1007
40 % 65 120 407
30 % 65 120 418
Entity #22 | Chains: BB
ribosomal protein eS1 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 22 2686
95 % 19 26 2747
90 % 19 26 2825
70 % 19 26 2890
50 % 19 29 2566
40 % 19 29 2600
30 % 19 33 2270
Entity #23 | Chains: BC
ribosomal protein uS5 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 15 4622
95 % 19 29 2406
90 % 19 29 2465
70 % 19 32 2301
50 % 32 55 1006
40 % 32 55 1050
30 % 32 55 1094
Entity #24 | Chains: BE
ribosomal protein eS4 protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 12 5932
95 % 5 12 6716
90 % 36 76 725
70 % 82 161 262
50 % 85 172 260
40 % 85 176 263
30 % 86 181 263
Entity #25 | Chains: BG
ribosomal protein eS6 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 75 523
95 % 36 76 692
90 % 36 76 723
70 % 40 82 701
50 % 83 163 300
40 % 83 168 300
30 % 83 168 323
Entity #26 | Chains: BH
ribosomal protein eS7 protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 75 522
95 % 36 76 697
90 % 36 76 732
70 % 36 77 756
50 % 85 169 279
40 % 85 169 295
30 % 87 172 297
Entity #27 | Chains: BI
ribosomal protein eS8 protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 71 555
95 % 36 76 701
90 % 36 76 735
70 % 36 76 772
50 % 85 171 262
40 % 85 175 269
30 % 85 175 289
Entity #28 | Chains: BJ
ribosomal protein uS4 protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 76 508
95 % 36 76 688
90 % 36 76 730
70 % 85 166 252
50 % 88 181 229
40 % 88 185 238
30 % 88 185 251
Entity #29 | Chains: BL
ribosomal protein uS17 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 77 501
95 % 36 77 682
90 % 36 77 716
70 % 36 78 741
50 % 86 178 238
40 % 86 178 251
30 % 86 178 269
Entity #3 | Chains: Bx
mRNA rna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #30 | Chains: BN
ribosomal protein uS15 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 76 514
95 % 36 76 694
90 % 36 76 726
70 % 86 171 248
50 % 88 178 239
40 % 89 183 241
30 % 89 183 256
Entity #31 | Chains: BO
ribosomal protein uS11 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 65 612
95 % 32 65 838
90 % 38 73 772
70 % 88 179 227
50 % 88 180 230
40 % 88 180 244
30 % 88 180 261
Entity #32 | Chains: BV
ribosomal protein eS21 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 61 671
95 % 36 75 714
90 % 36 75 745
70 % 36 76 767
50 % 78 152 329
40 % 78 152 342
30 % 78 152 356
Entity #33 | Chains: BW
ribosomal protein uS8 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 77 506
95 % 36 77 687
90 % 36 77 720
70 % 87 182 229
50 % 89 184 227
40 % 90 189 235
30 % 473 739 23
Entity #34 | Chains: BX
ribosomal protein uS12 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 75 529
95 % 36 79 659
90 % 36 80 683
70 % 88 185 210
50 % 89 191 219
40 % 89 191 231
30 % 89 191 242
Entity #35 | Chains: BY
ribosomal protein eS24 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 71 559
95 % 36 76 704
90 % 36 76 737
70 % 36 77 762
50 % 83 173 270
40 % 83 173 283
30 % 83 173 303
Entity #36 | Chains: Ba
ribosomal protein eS26 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 26 2117
95 % 19 29 2409
90 % 19 29 2467
70 % 19 29 2514
50 % 57 80 522
40 % 57 80 564
30 % 57 80 588
Entity #37 | Chains: Bb
ribosomal protein eS27 protein, length: 80 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 76 516
95 % 36 76 700
90 % 36 76 734
70 % 79 156 270
50 % 82 168 271
40 % 82 168 286
30 % 82 168 307
Entity #38 | Chains: Be
ribosomal protein eS30 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 36 1362
95 % 14 36 1809
90 % 22 49 1353
70 % 22 51 1335
50 % 84 156 359
40 % 84 156 380
30 % 84 156 392
Entity #39 | Chains: A3
5.8S ribosomal RNA rna, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: Bw
E/E-site-tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #40 | Chains: A4
5S ribosomal RNA rna, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #41 | Chains: AA
ribosomal protein uL2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 66 664
95 % 30 66 896
90 % 30 66 938
70 % 87 159 274
50 % 88 172 274
40 % 156 243 197
30 % 156 243 207
Entity #42 | Chains: AB
ribosomal protein uL3 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 25 2247
95 % 30 66 895
90 % 30 66 937
70 % 30 67 973
50 % 90 183 240
40 % 90 183 252
30 % 90 185 265
Entity #43 | Chains: AC
ribosomal protein uL4 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 11 7103
95 % 23 39 1692
90 % 23 39 1701
70 % 23 39 1772
50 % 81 147 337
40 % 89 183 258
30 % 89 183 276
Entity #44 | Chains: AD
ribosomal protein uL18 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 25 2219
95 % 30 66 930
90 % 30 66 969
70 % 30 66 1007
50 % 88 168 288
40 % 89 170 292
30 % 89 170 316
Entity #45 | Chains: AE
ribosomal protein eL6 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 27013
95 % 4 4 23335
90 % 4 4 22665
70 % 4 4 20786
50 % 4 4 18426
40 % 62 102 452
30 % 62 102 469
Entity #46 | Chains: AF
ribosomal protein uL30 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 32 1642
95 % 30 66 913
90 % 30 66 953
70 % 30 66 998
50 % 88 171 278
40 % 88 171 291
30 % 88 170 320
Entity #47 | Chains: AG
ribosomal protein eL8 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 10 8186
95 % 21 49 1331
90 % 21 49 1358
70 % 21 49 1403
50 % 83 156 328
40 % 83 158 335
30 % 83 158 350
Entity #48 | Chains: AH
ribosomal protein uL6 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 34 1490
95 % 30 66 905
90 % 30 66 941
70 % 30 66 995
50 % 88 178 265
40 % 89 179 271
30 % 157 251 199
Entity #49 | Chains: AI
ribosomal protein uL16 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 45467
95 % 30 66 922
90 % 30 66 954
70 % 31 78 816
50 % 82 161 305
40 % 82 161 322
30 % 82 161 339
Entity #5 | Chains: B1
18S ribosomal RNA rna, length: 1708 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #50 | Chains: AJ
ribosomal protein uL5 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 59 803
95 % 31 67 882
90 % 31 67 923
70 % 89 171 253
50 % 91 175 263
40 % 91 175 280
30 % 91 175 301
Entity #51 | Chains: AL
ribosomal protein eL13 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 25 2288
95 % 30 65 949
90 % 30 65 984
70 % 30 65 1013
50 % 86 161 315
40 % 87 168 304
30 % 87 168 325
Entity #52 | Chains: AM
ribosomal protein eL14 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 11 7273
95 % 19 25 2901
90 % 19 28 2639
70 % 19 28 2675
50 % 19 28 2679
40 % 19 29 2617
30 % 19 29 2553
Entity #53 | Chains: AN
ribosomal protein eL15 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 66 678
95 % 30 66 893
90 % 30 66 933
70 % 88 168 259
50 % 90 182 248
40 % 90 182 262
30 % 90 182 283
Entity #54 | Chains: AO
ribosomal protein uL13 protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 25 2226
95 % 30 66 919
90 % 30 66 934
70 % 30 66 1004
50 % 88 170 280
40 % 88 171 289
30 % 88 171 314
Entity #55 | Chains: AP
ribosomal protein uL22 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 24 2341
95 % 19 33 2035
90 % 19 33 2078
70 % 19 33 2138
50 % 88 180 251
40 % 88 180 268
30 % 88 180 288
Entity #56 | Chains: AQ
ribosomal protein eL18 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 25 2223
95 % 26 62 1005
90 % 30 66 964
70 % 30 67 979
50 % 87 171 287
40 % 87 176 285
30 % 87 176 309
Entity #57 | Chains: AR
ribosomal protein eL19 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 62 731
95 % 30 66 901
90 % 30 66 943
70 % 30 67 974
50 % 86 169 289
40 % 86 170 298
30 % 86 170 321
Entity #58 | Chains: AS
ribosomal protein eL20 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 25 2267
95 % 26 56 1134
90 % 26 56 1166
70 % 30 60 1121
50 % 86 161 318
40 % 87 162 321
30 % 87 163 334
Entity #59 | Chains: AT
ribosomal protein eL21 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 65 698
95 % 30 66 925
90 % 30 66 963
70 % 30 67 981
50 % 87 160 319
40 % 87 166 315
30 % 89 173 306
Entity #6 | Chains: BD
ribosomal protein uS3 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 38 1130
95 % 30 66 824
90 % 30 66 860
70 % 30 67 889
50 % 75 152 325
40 % 75 152 337
30 % 75 152 353
Entity #60 | Chains: AU
ribosomal protein eL22 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 21 2966
95 % 19 29 2450
90 % 19 29 2508
70 % 19 29 2554
50 % 19 33 2230
40 % 35 55 1061
30 % 35 56 1087
Entity #61 | Chains: AV
ribosomal protein uL14 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 66 666
95 % 30 66 898
90 % 30 66 940
70 % 89 182 235
50 % 89 183 242
40 % 89 183 256
30 % 89 183 275
Entity #62 | Chains: AW
ribosomal protein eL24 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 11 7329
95 % 11 11 7965
90 % 11 11 7757
70 % 11 11 7724
50 % 11 11 7279
40 % 11 11 7030
30 % 11 11 6598
Entity #63 | Chains: AX
ribosomal protein uL23 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 28 1953
95 % 19 28 2518
90 % 19 28 2663
70 % 19 29 2553
50 % 35 52 1081
40 % 35 52 1102
30 % 35 52 1141
Entity #64 | Chains: AY
ribosomal protein uL24 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 66 667
95 % 30 66 903
90 % 30 66 945
70 % 5 6 14973
50 % 88 180 250
40 % 88 180 267
30 % 88 180 287
Entity #65 | Chains: AZ
ribosomal protein eL27 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 65 688
95 % 30 65 937
90 % 30 65 976
70 % 30 65 1016
50 % 86 156 331
40 % 87 169 299
30 % 88 171 318
Entity #66 | Chains: Aa
ribosomal protein uL15 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 25 2300
95 % 30 66 894
90 % 30 66 935
70 % 30 68 951
50 % 88 173 272
40 % 89 174 284
30 % 89 176 300
Entity #67 | Chains: Ab
ribosomal protein eL29 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 17179
95 % 4 13 6093
90 % 4 13 6126
70 % 4 13 6045
50 % 4 13 5792
40 % 4 13 5645
30 % 4 13 5381
Entity #68 | Chains: Ac
ribosomal protein eL30 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 21 2984
95 % 19 28 2482
90 % 19 28 2546
70 % 31 72 892
50 % 91 179 252
40 % 91 179 270
30 % 91 179 290
Entity #69 | Chains: Ad
ribosomal protein eL31 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 28 1895
95 % 19 28 2457
90 % 19 28 2525
70 % 19 28 2562
50 % 88 170 281
40 % 88 170 296
30 % 88 170 319
Entity #7 | Chains: BF
ribosomal protein uS7 protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 77 499
95 % 36 77 676
90 % 36 77 708
70 % 43 92 627
50 % 88 182 228
40 % 88 182 242
30 % 88 182 257
Entity #70 | Chains: Ae
ribosomal protein eL32 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 66 659
95 % 30 66 891
90 % 30 66 931
70 % 30 67 971
50 % 89 174 266
40 % 89 178 273
30 % 89 179 293
Entity #71 | Chains: Af
ribosomal protein eL33 protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 33 1572
95 % 30 65 933
90 % 30 65 973
70 % 30 65 1012
50 % 86 166 303
40 % 87 168 311
30 % 87 168 330
Entity #72 | Chains: Ag
ribosomal protein eL34 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 65 690
95 % 30 65 941
90 % 30 65 986
70 % 30 65 1018
50 % 86 155 334
40 % 86 155 345
30 % 86 155 359
Entity #73 | Chains: Ah
ribosomal protein uL29 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 26 2160
95 % 30 66 929
90 % 30 66 967
70 % 30 66 988
50 % 87 172 285
40 % 88 183 254
30 % 89 185 266
Entity #74 | Chains: Ai
ribosomal protein eL36 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 33 1549
95 % 30 65 938
90 % 30 65 977
70 % 30 65 1017
50 % 30 67 1008
40 % 87 163 318
30 % 87 173 311
Entity #75 | Chains: Aj
ribosomal protein eL37 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 25 2297
95 % 19 32 2141
90 % 19 32 2175
70 % 19 34 2078
50 % 88 178 258
40 % 88 178 274
30 % 88 178 295
Entity #76 | Chains: Ak
ribosomal protein eL38 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 61 736
95 % 30 65 943
90 % 30 65 979
70 % 30 68 956
50 % 30 68 993
40 % 30 68 1038
30 % 30 68 1081
Entity #77 | Chains: Al
ribosomal protein eL39 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 41 1185
95 % 30 66 923
90 % 30 66 962
70 % 87 161 269
50 % 88 174 269
40 % 88 176 278
30 % 89 177 298
Entity #78 | Chains: Am
ribosomal protein eL40 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 35 1442
95 % 23 35 1903
90 % 23 36 1853
70 % 64 91 440
50 % 64 91 478
40 % 64 91 506
30 % 64 91 533
Entity #79 | Chains: An
ribosomal protein eL41 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 70 565
95 % 33 73 744
90 % 33 73 781
70 % 74 145 284
50 % 74 145 338
40 % 74 145 354
30 % 74 145 369
Entity #8 | Chains: BK
ribosomal protein eS10 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 26 2158
95 % 19 26 2750
90 % 19 26 2830
70 % 19 26 2892
50 % 19 27 2784
40 % 19 27 2797
30 % 19 27 2763
Entity #80 | Chains: Ao
ribosomal protein eL42 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 66 658
95 % 30 66 911
90 % 30 66 950
70 % 87 162 264
50 % 89 169 284
40 % 89 170 293
30 % 89 170 317
Entity #81 | Chains: Ap
ribosomal protein eL43 protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 66 662
95 % 30 66 907
90 % 30 66 960
70 % 30 69 925
50 % 88 169 283
40 % 89 170 294
30 % 111 193 249
Entity #82 | Chains: At
ribosomal protein eL28 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 25 2278
95 % 30 65 942
90 % 30 65 978
70 % 30 65 1019
50 % 30 65 1048
40 % 30 66 1072
30 % 30 68 1076
Entity #83 | Chains: Au
ribosomal protein uL1 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 26 2201
95 % 17 26 2791
90 % 17 26 2877
70 % 17 27 2798
50 % 21 58 1156
40 % 21 58 1195
30 % 21 58 1235
Entity #84 | Chains: Aq
ribosomal protein uL11 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 36 1359
95 % 13 36 1805
90 % 13 36 1846
70 % 18 54 1244
50 % 23 64 1061
40 % 23 64 1095
30 % 23 64 1133
Entity #85 | Chains: AK
ribosomal protein uL10 protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 12915
95 % 9 20 3885
90 % 9 20 3962
70 % 9 20 3945
50 % 12 27 2801
40 % 18 36 2037
30 % 18 36 2067
Entity #86 | Chains: Ct
eukaryotic elongation factor 2 (eEF2) protein, length: 853 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 33822
95 % 5 8 11729
90 % 5 8 11586
70 % 5 9 9357
50 % 18 37 1257
40 % 18 37 1304
30 % 18 37 1339
Entity #9 | Chains: BM
ribosomal protein eS12 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 57 732
95 % 31 69 785
90 % 31 69 834
70 % 36 74 803
50 % 36 75 816
40 % 36 75 856
30 % 36 75 894

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures