6H4P

Crystal structure of human KDM4A in complex with compound 16a


Sequence Similarity Clusters for the Entities in PDB 6H4P

Entity #1 | Chains: A,B,C,D
Lysine-specific demethylase 4A protein, length: 360 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 72 193
95 % 23 75 235
90 % 23 75 246
70 % 28 82 273
50 % 303 363 98
40 % 303 363 117
30 % 303 363 122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6G5X 1 A, B Lysine-specific demethylase 4A JMJD2A 9606 1.14.11 | Details
2 4V2W 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN UNP RESIDUES 1-359 9606 1.14.11 | Details
3 6G5W 1 A, B Lysine-specific demethylase 4A JMJD2A 9606 1.14.11 | Details
4 2OX0 1 A, B JmjC domain-containing histone demethylation protein 3A 9606 1.14.11 | Details
5 2OQ6 1 A, B JmjC domain-containing histone demethylation protein 3A 9606 1.14.11 | Details
6 3PDQ 1 A, B Lysine-specific demethylase 4A Catalytic domain, residues 1-359 9606 1.14.11 | Details
7 5F3C 1 A, B, C, D Lysine-specific demethylase 4A UNP residues 1-359 9606 1.14.11 | Details
8 5F32 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
9 5F2S 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
10 4V2V 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
11 6H8P 1 A, B Lysine-specific demethylase 4A 9606 1.14.11 | Details
12 5ANQ 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A JMJN, JMJC, RESIDUES 1-359 9606
13 5A7Q 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A UNP RESIDUES 1-359 9606 1.14.11 | Details
14 5F3E 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
15 5TVR 1 A, B Lysine-specific demethylase 4A UNP residues 1-159 9606 1.14.11 | Details
16 2YBP 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
17 6H4V 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
18 2OQ7 1 A, B JmjC domain-containing histone demethylation protein 3A 9606
19 6H4R 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
20 2Q8C 1 A, B JmjC domain-containing histone demethylation protein 3A Jumonji domain 9606 1.14.11 | Details
21 6CG1 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
22 6H4P 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
23 5A7S 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A UNP RESIDUES 1-359 9606
24 5A7O 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A UNP RESIDUES 1-359 9606 1.14.11 | Details
25 3U4S 1 A, B Lysine-specific demethylase 4A JMJC DOMAIN, UNP residues 1-359 9606 1.14.11 | Details
26 2OT7 1 A, B JmjC domain-containing histone demethylation protein 3A 9606 1.14.11 | Details
27 5F37 1 A, B, C, D Lysine-specific demethylase 4A UNP residues 1-359 9606 1.14.11 | Details
28 5FYI 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 4-354 9606 1.14.11 | Details
29 5F3I 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
30 6H4U 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
31 6H4O 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
32 2Q8E 1 A, B JmjC domain-containing histone demethylation protein 3A Jumonji domain 9606 1.14.11 | Details
33 2VD7 1 A, B JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 3A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
34 3RVH 1 A, B Lysine-specific demethylase 4A Catalytic domain 9606 1.14.11 | Details
35 2P5B 1 A, B JmjC domain-containing histone demethylation protein 3A catalytic core 9606 1.14.11 | Details
36 6H4X 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
37 6H4Q 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
38 2OS2 1 A, B JmjC domain-containing histone demethylation protein 3A 9606 1.14.11 | Details
39 5FYC 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 4-354 9606 1.14.11 | Details
40 5FWE 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN 9606 1.14.11 | Details
41 5A7P 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A UNP RESIDUES 1-359 9606 1.14.11 | Details
42 6CG2 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
43 4GD4 1 A, B Lysine-specific demethylase 4A catalytic domain 9606 1.14.11 | Details
44 5A80 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 1-359 9606 1.14.11 | Details
45 6H4T 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
46 6H4Y 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
47 2PXJ 1 A, B JmjC domain-containing histone demethylation protein 3A catalytic core 9606 1.14.11 | Details
48 5FY8 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 4-354 9606 1.14.11 | Details
49 4URA 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 1-359 9606 1.14.11 | Details
50 6H4S 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
51 5A7N 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A UNP RESIDUES 1-359 9606 1.14.11 | Details
52 2Q8D 1 A, B JmjC domain-containing histone demethylation protein 3A Jumonji domain 9606 1.14.11 | Details
53 4AI9 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
54 5FYH 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 4-354 9606 1.14.11 | Details
55 5LY1 1 A, B, C, D Lysine-specific demethylase 4A CATALYTIC DOMAIN UNP residues 1-359 9606 1.14.11 | Details
56 2YBS 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
57 5FPV 1 A, B, C, D, E, F, G, H LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 4-354 9606
58 2YBK 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
59 5A7W 1 A LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 1-359 9606 1.14.11 | Details
60 4BIS 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A 9606 1.14.11 | Details
61 5F39 1 A, B, C, D Lysine-specific demethylase 4A UNP residues 1-359 9606 1.14.11 | Details
62 2WWJ 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 7-353 9606
63 5F2W 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
64 2GP5 1 A, B Jumonji domain-containing protein 2A 9606 1.14.11 | Details
65 3NJY 1 A, B Lysine-specific demethylase 4A Catalytic domain 9606 1.14.11 | Details
66 5F3G 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
67 5LY2 1 A, B, C, D Lysine-specific demethylase 4A FRAGMENT: CATALYTIC DOMAIN (1-359) 9606 1.14.11 | Details
68 2GP3 1 A, B Jumonji domain-containing protein 2A 9606 1.14.11 | Details
69 6HGT 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
70 5F5I 1 A, B Lysine-specific demethylase 4A Oxidoreductase-2OG 9606 1.14.11 | Details
71 5TVS 1 A, B Lysine-specific demethylase 4A UNP residues 1-159 9606 1.14.11 | Details
72 6H4W 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details