Sequence Similarity Clusters for the Entities in PDB 6H4W

Entity #1 | Chains: A,B,C,D
Lysine-specific demethylase 4A protein, length: 360 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 71 71 170
95 % 75 75 216 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.6
PDBFlex
90 % 75 75 226
70 % 82 82 236
50 % 357 357 94
40 % 357 357 108
30 % 357 357 110

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5FJK 1 A LYSINE-SPECIFIC DEMETHYLASE 4C CATALYTIC DOMAIN, RESIDUES 3-347 9606 1.14.11 | Details
2 6G5X 1 A, B Lysine-specific demethylase 4A JMJD2A 9606 1.14.11 | Details
3 4V2W 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN UNP RESIDUES 1-359 9606 1.14.11 | Details
4 6G5W 1 A, B Lysine-specific demethylase 4A JMJD2A 9606 1.14.11 | Details
5 4LXL 1 A Lysine-specific demethylase 4B Catalytic domain, UNP RESIDUES 1-348 9606 1.14.11 | Details
6 2OX0 1 A, B JmjC domain-containing histone demethylation protein 3A 9606 1.14.11 | Details
7 2OQ6 1 A, B JmjC domain-containing histone demethylation protein 3A 9606 1.14.11 | Details
8 3PDQ 1 A, B Lysine-specific demethylase 4A Catalytic domain, residues 1-359 9606 1.14.11 | Details
9 5KR7 1 A, B Lysine-specific demethylase 4C 9606 1.14.11 | Details
10 5F3C 1 A, B, C, D Lysine-specific demethylase 4A UNP residues 1-359 9606 1.14.11 | Details
11 5F32 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
12 5F2S 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
13 4V2V 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
14 6H8P 1 A, B Lysine-specific demethylase 4A 9606 1.14.11 | Details
15 5ANQ 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A JMJN, JMJC, RESIDUES 1-359 9606
16 5A7Q 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A UNP RESIDUES 1-359 9606 1.14.11 | Details
17 4XDO 1 A, B Lysine-specific demethylase 4C catalytic domain (UNP residues 10-347) 9606 1.14.11 | Details
18 5F3E 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
19 5TVR 1 A, B Lysine-specific demethylase 4A UNP residues 1-159 9606 1.14.11 | Details
20 2YBP 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
21 5VGI 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
22 5FJH 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4C CATALYTIC DOMAIN, RESIDUES 3-347 9606 1.14.11 | Details
23 6H4V 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
24 2OQ7 1 A, B JmjC domain-containing histone demethylation protein 3A 9606
25 6H4R 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
26 2Q8C 1 A, B JmjC domain-containing histone demethylation protein 3A Jumonji domain 9606 1.14.11 | Details
27 6CG1 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
28 6H4P 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
29 5A7S 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A UNP RESIDUES 1-359 9606
30 5A7O 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A UNP RESIDUES 1-359 9606 1.14.11 | Details
31 3U4S 1 A, B Lysine-specific demethylase 4A JMJC DOMAIN, UNP residues 1-359 9606 1.14.11 | Details
32 2OT7 1 A, B JmjC domain-containing histone demethylation protein 3A 9606 1.14.11 | Details
33 5F37 1 A, B, C, D Lysine-specific demethylase 4A UNP residues 1-359 9606 1.14.11 | Details
34 5FYI 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 4-354 9606 1.14.11 | Details
35 5F3I 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
36 6H4U 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
37 4XDP 1 A, B Lysine-specific demethylase 4C catalytic domain (UNP residues 10-347) 9606 1.14.11 | Details
38 6H4O 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
39 2Q8E 1 A, B JmjC domain-containing histone demethylation protein 3A Jumonji domain 9606 1.14.11 | Details
40 2VD7 1 A, B JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 3A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
41 3RVH 1 A, B Lysine-specific demethylase 4A Catalytic domain 9606 1.14.11 | Details
42 2P5B 1 A, B JmjC domain-containing histone demethylation protein 3A catalytic core 9606 1.14.11 | Details
43 6H4X 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
44 6H4Q 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
45 2OS2 1 A, B JmjC domain-containing histone demethylation protein 3A 9606 1.14.11 | Details
46 5FYC 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 4-354 9606 1.14.11 | Details
47 5FWE 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN 9606 1.14.11 | Details
48 5A7P 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A UNP RESIDUES 1-359 9606 1.14.11 | Details
49 6CG2 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
50 4GD4 1 A, B Lysine-specific demethylase 4A catalytic domain 9606 1.14.11 | Details
51 5A80 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 1-359 9606 1.14.11 | Details
52 6H4T 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
53 6H4Y 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
54 2PXJ 1 A, B JmjC domain-containing histone demethylation protein 3A catalytic core 9606 1.14.11 | Details
55 5FY8 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 4-354 9606 1.14.11 | Details
56 4URA 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 1-359 9606 1.14.11 | Details
57 6H4S 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
58 5A7N 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A UNP RESIDUES 1-359 9606 1.14.11 | Details
59 2Q8D 1 A, B JmjC domain-containing histone demethylation protein 3A Jumonji domain 9606 1.14.11 | Details
60 4AI9 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
61 5FYH 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 4-354 9606 1.14.11 | Details
62 5LY1 1 A, B, C, D Lysine-specific demethylase 4A CATALYTIC DOMAIN UNP residues 1-359 9606 1.14.11 | Details
63 2YBS 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
64 5FPV 1 A, B, C, D, E, F, G, H LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 4-354 9606
65 2YBK 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A CATALYTIC DOMAIN, RESIDUES 1-359 9606 1.14.11 | Details
66 5A7W 1 A LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 1-359 9606 1.14.11 | Details
67 5A7W 2 B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 1-359 9606 1.14.11 | Details
68 4BIS 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A 9606 1.14.11 | Details
69 5VMP 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
70 5F39 1 A, B, C, D Lysine-specific demethylase 4A UNP residues 1-359 9606 1.14.11 | Details
71 2WWJ 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4A RESIDUES 7-353 9606
72 5F2W 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
73 2GP5 1 A, B Jumonji domain-containing protein 2A 9606 1.14.11 | Details
74 3NJY 1 A, B Lysine-specific demethylase 4A Catalytic domain 9606 1.14.11 | Details
75 5F3G 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
76 2XML 1 A, B LYSINE-SPECIFIC DEMETHYLASE 4C JUMONJI DOMAIN, RESIDUES 1-347 9606 1.14.11 | Details
77 5LY2 1 A, B, C, D Lysine-specific demethylase 4A FRAGMENT: CATALYTIC DOMAIN (1-359) 9606 1.14.11 | Details
78 2GP3 1 A, B Jumonji domain-containing protein 2A 9606 1.14.11 | Details
79 6HGT 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details
80 5F5I 1 A, B Lysine-specific demethylase 4A Oxidoreductase-2OG 9606 1.14.11 | Details
81 5TVS 1 A, B Lysine-specific demethylase 4A UNP residues 1-159 9606 1.14.11 | Details
82 6H4W 1 A, B, C, D Lysine-specific demethylase 4A 9606 1.14.11 | Details