Sequence Similarity Clusters for the Entities in PDB 6H50

Entity #1 | Chains: A
Lysine-specific demethylase 5B,Lysine-specific demethylase 5B protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 42 1219
95 % 34 52 1292 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 34 52 1331
70 % 35 53 1297
50 % 35 53 1333
40 % 35 53 1389
30 % 35 53 1409

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures