Sequence Similarity Clusters for the Entities in PDB 6H51

Entity #1 | Chains: A
Lysine-specific demethylase 5B,Lysine-specific demethylase 5B protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 42 1194
95 % 36 52 1253 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 36 52 1290
70 % 37 53 1266
50 % 37 53 1301
40 % 37 53 1345
30 % 37 53 1373

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5FYZ 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
2 5FYT 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101,374-770 9606 1.14.11 | Details
3 5FYB 1 A LYSINE-SPECIFIC DEMETHYLASE 5B, LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101 AND 374-770 9606 1.14.11 | Details
4 5FYV 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101,374-770 9606 1.14.11 | Details
5 6EIU 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B 9606 1.14.11 | Details
6 5FZ8 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101,374-770 9606 1.14.11 | Details
7 5FYS 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101,374-770 9606 1.14.11 | Details
8 5FZF 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
9 5A3T 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-772 9606 1.14.11 | Details
10 5FZG 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
11 5FZI 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
12 5FWJ 1 A, B HISTONE DEMETHYLASE JARID1C KDM5-C49 (2-(((2-((2-(DIMETHYLAMINO)ETHYL)(ETHYL) AMINO)-2-OXOETHYL)AMINO)METHYL) ISONICOTINIC ACID) JMJC DOMAIN, UNP RESIDUES 8-83 AND 384-772 9606 1.14.11 | Details
13 5A3N 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-772 9606 1.14.11 | Details
14 5A3W 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-772 9606 1.14.11 | Details
15 5FZE 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
16 5A3P 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101,374-770 9606 1.14.11 | Details
17 6EK6 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B 9606 1.14.11 | Details
18 5FZC 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101,374-770 9606 1.14.11 | Details
19 6EJ0 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B 9606 1.14.11 | Details
20 5FY9 1 A LYSINE-SPECIFIC DEMETHYLASE 5B, LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
21 5FZD 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
22 5FYU 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101,374-770 9606 1.14.11 | Details
23 5FZ9 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101,374-770 9606 1.14.11 | Details
24 5FZH 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
25 6EJ1 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B 9606 1.14.11 | Details
26 5FZ4 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
27 5FZK 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
28 5FZA 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101,374-770 9606 1.14.11 | Details
29 5FY4 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES, 26-101 AND 374-770 9606 1.14.11 | Details
30 6H52 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B 9606 1.14.11 | Details
31 5FUP 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101 TO 374-772 9606 1.14.11 | Details
32 6EIY 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B 9606 1.14.11 | Details
33 6EIN 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B CYL- Cysteine modified compound,CYL- Cysteine modified compound 9606 1.14.11 | Details
34 5A1F 1 A LYSINE-SPECIFIC DEMETHYLASE 5B, LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES, JMJC DOMAIN, RESIDUES 9606 1.14.11 | Details
35 6H50 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B 9606 1.14.11 | Details
36 5FYY 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
37 6H51 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B 9606 1.14.11 | Details
38 5FZB 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, UNP RESIDUES 26-101,374-770 9606 1.14.11 | Details
39 5FPU 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-772 9606 1.14.11 | Details
40 5FUN 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26- 101,374-772 9606 1.14.11 | Details
41 5FZ6 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
42 5LW9 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B CCT365714 9606 1.14.11 | Details
43 5FZ7 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
44 6H4Z 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B 9606 1.14.11 | Details
45 5LWB 1 A Lysine-specific demethylase 5B,Lysine-specific demethylase 5B,Lysine-specific demethylase 5B 9606 1.14.11 | Details
46 5FZ1 1 A LYSINE-SPECIFIC DEMETHYLASE 5B, LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
47 5FPL 1 A LYSINE-SPECIFIC DEMETHYLASE 5B, LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 25-101,374-772 9606 1.14.11 | Details
48 5FZ3 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
49 5FV3 1 A LYSINE-SPECIFIC DEMETHYLASE 5B, LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101, JMJC DOMAIN, RESIDUES 374-770 9606 1.14.11 | Details
50 5FZ0 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details
51 5FZM 1 A LYSINE-SPECIFIC DEMETHYLASE 5B, LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES, JMJC DOMAIN, RESIDUES 9606 1.14.11 | Details
52 5FY5 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101 AND 374-770 9606 1.14.11 | Details
53 5FZL 1 A LYSINE-SPECIFIC DEMETHYLASE 5B JMJC DOMAIN, RESIDUES 26-101,374-770 9606 1.14.11 | Details