6IAP

structure of human NKp46 in complex with antibody NKp46-1 and NKp46-4


Sequence Similarity Clusters for the Entities in PDB 6IAP

Entity #1 | Chains: A
Natural cytotoxicity triggering receptor 1 protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 48494
95 % 2 2 31903
90 % 2 2 30640
70 % 2 2 36983
50 % 2 2 32054
40 % 22 33 1474
30 % 27 40 1263
Entity #2 | Chains: D
Fab NKp46-4 light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74864
95 % 1 1 61669
90 % 337 594 4
70 % 1591 2557 2
50 % 4051 6625 1
40 % 4052 6626 1
30 % 4081 6673 1
Entity #3 | Chains: E
Fab NKp46-4 heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74863
95 % 1 1 61668
90 % 1 1 58106
70 % 1940 3169 1
50 % 4052 6625 1
40 % 4053 6626 1
30 % 4082 6673 1
Entity #4 | Chains: H
Fab NKp46-1 heavy chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74866
95 % 2 2 37321
90 % 2 2 35688
70 % 1941 3169 1
50 % 4053 6625 1
40 % 4054 6626 1
30 % 4083 6673 1
Entity #5 | Chains: L
Fab NKp46-1 light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 48495
95 % 9 10 5894
90 % 338 594 4
70 % 1592 2557 2
50 % 4054 6625 1
40 % 4055 6626 1
30 % 4084 6673 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6IAP 3 E Fab NKp46-4 heavy chain 32630