Sequence Similarity Clusters for the Entities in PDB 6IAS

Entity #1 | Chains: H
Fab NKp46-1 heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 78356
95 % 1 2 39338 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 1 2 33719
70 % 271 2903 1
50 % 290 3048 1
40 % 290 3048 1
30 % 571 6095 1
Entity #2 | Chains: L
Fab NKp46-1 light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45050
95 % 1 10 5402 Flexibility: Low
Max RMSD: 7.7, Avg RMSD: 2.3
PDBFlex
90 % 45 530 4
70 % 217 2368 2
50 % 275 3003 2
40 % 275 3003 2
30 % 572 6095 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures