Sequence Similarity Clusters for the Entities in PDB 6IAS

Entity #1 | Chains: H
Fab NKp46-1 heavy chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 86815
95 % 1 2 31108 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 1 2 38089
70 % 280 2969 1
50 % 300 3121 1
40 % 300 3121 1
30 % 590 6236 1
Entity #2 | Chains: L
Fab NKp46-1 light chain protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46428
95 % 1 10 5403 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 74 797 2
70 % 225 2418 2
50 % 284 3071 2
40 % 284 3071 2
30 % 591 6236 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures