Sequence Similarity Clusters for the Entities in PDB 6ILL

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 16801
95 % 1 6 14986
90 % 1 6 14830
70 % 8 16 5065
50 % 11 29 868
40 % 106 222 197
30 % 106 222 205
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 13367
95 % 1 7 12917
90 % 1 7 12738
70 % 11 31 825
50 % 99 222 197
40 % 99 222 209
30 % 104 235 214
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 14838
95 % 1 7 13022
90 % 1 7 12769
70 % 11 31 824
50 % 8 23 953
40 % 108 236 189
30 % 129 278 128
Entity #4 | Chains: D
Capsid protein VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 54108
95 % 3 8 10164
90 % 10 20 4016
70 % 42 96 650
50 % 83 154 419
40 % 83 154 434
30 % 83 154 457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures