Sequence Similarity Clusters for the Entities in PDB 6ILL

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 14769
95 % 1 6 14289
90 % 1 6 14324
70 % 8 16 4729
50 % 11 29 813
40 % 61 122 319
30 % 94 206 204
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 12390
95 % 1 7 12264
90 % 1 7 12117
70 % 11 31 741
50 % 87 204 199
40 % 87 204 213
30 % 92 217 214
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 15065
95 % 1 7 12243
90 % 1 7 12093
70 % 11 31 742
50 % 96 216 177
40 % 96 218 189
30 % 117 259 126
Entity #4 | Chains: D
Capsid protein VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46215
95 % 3 8 9553
90 % 10 20 3736
70 % 29 79 738
50 % 72 141 426
40 % 72 141 446
30 % 72 141 465

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures