Sequence Similarity Clusters for the Entities in PDB 6ILL

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 13737
95 % 1 6 13504
90 % 1 6 14562
70 % 8 16 4953
50 % 11 29 849
40 % 98 213 201
30 % 98 215 211
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 12935
95 % 1 7 12767
90 % 1 7 12592
70 % 11 31 804
50 % 91 213 197
40 % 91 213 214
30 % 96 226 215
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 16089
95 % 1 7 12768
90 % 1 7 12593
70 % 11 31 805
50 % 8 23 931
40 % 100 227 192
30 % 121 268 126
Entity #4 | Chains: D
Capsid protein VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 47719
95 % 3 8 9936
90 % 10 20 3955
70 % 42 96 631
50 % 76 148 423
40 % 76 148 443
30 % 76 148 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Q4W 2 2 Coxsackievirus capsid protein VP2 138950
2 4Q4X 2 2 Coxsackievirus capsid protein VP2 138950
3 4Q4Y 2 2 Coxsackievirus capsid protein VP2 138950
4 1AYM 2 2 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
5 4WM8 2 B VP2 138951
6 5BNP 2 B Capsid protein VP2 UNP residues 70-317 138951
7 3VBH 2 B Genome polyprotein, capsid protein VP2 138948
8 1PVC 3 2 POLIOVIRUS TYPE 3, SABIN STRAIN P3/SABIN P3/LEON/12A(1)B 138950
9 5BNO 2 B Capsid protein VP2 UNP residues 70-317 138951
10 1FPN 2 2 COAT PROTEIN VP2 147711
11 5OSN 2 B Capsid protein 12064
12 1ND2 2 B coat protein VP2 147711
13 4WM7 2 B VP2 138951
14 1HXS 2 2 GENOME POLYPROTEIN, COAT PROTEIN VP2 RESIDUES 69-340 138950
15 5BNN 2 B Capsid protein VP2 UNP residues 70-317 138951
16 5CFD 3 C VP2 1821750
17 1NCQ 2 B COAT PROTEIN VP2 147712
18 5CFC 3 C VP2 residues 154-411 1821750
19 3CJI 3 C Polyprotein sequence database residues 435-673 390157
20 1D4M 2 2 PROTEIN (COXSACKIEVIRUS A9) VP2 138949
21 4RHV 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
22 1EAH 2 2 POLIOVIRUS TYPE 2 COAT PROTEINS VP1 TO VP4 138950
23 4Q4V 2 2 Coxsackievirus capsid protein VP2 138950
24 1K5M 2 B CHIMERA OF HRV14 COAT PROTEIN VP2 (P1B) AND the V3 loop of HIV-1 gp120 THE CHIMERA CONSISTS OF THE HRV14 COAT PROTEIN VP2 (P1B) AND RESIDUES 314-325 OF HIV-1 gp120. 147712
25 1QJU 2 2 PROTEIN VP2 RESIDUES 70-330 147711
26 3VBF 2 B Genome Polyprotein, capsid protein VP2 STRAIN FUYANG, ANHUI. P.R.C/17.08/1 138948
27 2PLV 2 2 HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2) 138950
28 4PDW 2 B Genome polyprotein resdiues 70-331 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
29 4CDQ 2 B VP2 138948
30 3ZFE 2 B VP2 VIRION OF HUMAN ENTEROVIRUS 71 138948
31 1QJX 2 2 PROTEIN VP2 RESIDUES 70-330 147711
32 1QJY 2 2 PROTEIN VP2 RESIDUES 70-330 147711
33 1NCR 2 B coat protein VP2 147711
34 3VBO 2 B Genome Polyprotein, capsid protein VP2 138948
35 1AYN 2 2 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
36 1C8M 2 2 HUMAN RHINOVIRUS 16 COAT PROTEIN RESIDUES 79-330 147711
37 2MEV 2 2 MENGO VIRUS COAT PROTEIN (SUBUNIT VP2) 1821749
38 1AR7 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
39 1ND3 2 B coat protein VP2 147711
40 1BEV 2 2 BOVINE ENTEROVIRUS COAT PROTEINS VP1 TO VP4 12064
41 4JGY 2 B Polyprotein, capsid protein VP2 STRAIN NINGBO.CHN/028-2/2009 138948
42 1AL2 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
43 1PO1 3 2 POLIOVIRUS TYPE 1 MAHONEY 138950
44 1AR9 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
45 5C4W 2 B VP2 138948
46 1H8T 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
47 1PO2 3 2 POLIOVIRUS TYPE 1 MAHONEY 138950
48 1ASJ 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
49 1Z7S 2 2 Human COXSACKIEVIRUS A21 Viral Protein 2 138950
50 1OOP 2 B Coat protein VP2 138949
51 4CDX 2 B VP2 138948
52 3VDD 2 B Protein VP2 UNP residues 70-330 147711
53 1NA1 2 B Coat protein VP2 147712
54 4CDU 2 B VP2 138948
55 1VBB 3 2 POLIOVIRUS TYPE 3 138950
56 1AR6 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
57 1AR8 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
58 4N53 2 B Capsid protein VP2 138948
59 4CDW 2 B VP2 138948
60 4CEY 2 B VP2 138948
61 1VBC 3 2 POLIOVIRUS TYPE 3 138950
62 3TN9 2 2 Protein VP2 147711
63 3ZFG 2 B VP2 VIRION OF HUMAN ENTEROVIRUS 71 138948
64 1VBE 3 2 POLIOVIRUS TYPE 3 138950
65 4CEW 2 B VP2 138948
66 3VBS 2 B Genome Polyprotein, capsid protein VP2 138948
67 5ABJ 2 B VP2 UNP RESIDUES 70-323 138948
68 1VBD 3 2 POLIOVIRUS TYPE 1 MAHONEY P1/MAHONEY 138950
69 1TME 2 2 THEILER'S MURINE ENCEPHALOMYELITIS VIRUS (SUBUNIT VP2) 1821750
70 3ZFF 2 B VP2 138948
71 1RHI 2 2 HUMAN RHINOVIRUS 3 COAT PROTEIN 147712
72 1VBA 3 2 POLIOVIRUS TYPE 3 138950
73 4JGZ 2 B Polyprotein, capsid protein VP2 STRAIN NINGBO.CHN/028-2/2009 138948
74 1MQT 2 B Polyprotein Capsid Protein SVDV COAT PROTEIN VP2 138949
75 1RVF 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN 147712
76 4GB3 2 2 coat protein 2 UNP residues 70-332 138949
77 2X5I 2 B VP2 138949
78 1PIV 3 2 POLIOVIRUS TYPE 3 (SUBUNIT VP2) 138950
79 1COV 2 2 COXSACKIEVIRUS COAT PROTEIN 138949
80 1R1A 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
81 1EV1 2 2 ECHOVIRUS 1 VP1, VP2, VP3, VP4 138949
82 4N43 2 B Capsid protein VP2 EV71 capsid protein VP2 138948
83 3VBR 2 B Genome Polyprotein, capsid protein VP0 138948
84 1V9U 2 2 Coat protein VP2 147711
85 4AED 2 B VP2 138948
86 3VBU 2 B Genome Polyprotein, capsid protein VP0 138948
87 3DPR 2 B Protein VP2 147711
88 4L3B 2 B Protein VP2 UNP residues 70-330 147711
89 6SK5 2 B Rhinovirus B5 VP2 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
90 6SK6 2 B Rhinovirus B5 VP2 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
91 6SK7 2 B VP2 capsid protein 147711 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
92 6RJF 2 2 VP2 138949
93 6O06 2 B VP2 UNP residues 77-330 138949
94 6MZI 3 C viral protein 2 UNP residues 70-317 138951
95 6I2K 2 B Polyprotein 138948
96 6ILL 2 B Capsid protein VP2 138949
97 6ILM 2 B Capsid protein VP2 138949
98 6ILN 2 B Capsid protein VP2 138949
99 6ILO 2 B Capsid protein VP2 138949
100 6ILP 2 B Capsid protein VP2 138949
101 6ILJ 2 B Capsid protein VP2 138949
102 6ILK 2 B Capsid protein VP2 138949
103 6IIJ 2 B VP2 138948
104 6AKS 2 B VP2 138948
105 6AKT 2 B VP2 138948
106 6AKU 2 B VP2 138948
107 6HHT 2 B1, B2, E1, E2, H1, H2, K1, K2, N1, N2, Q1, Q2, T1, T2, W1, W2, Z2, c2, f2, i2, l2, o2, r2, u2, x2 Echovirus 18 capsid protein 2 138949
108 6AJ7 4 B Capsid protein VP2 138951
109 6AJ9 6 B Capsid protein VP2 138951
110 6AJ2 2 B Capsid protein VP2 138951
111 6AJ3 2 B Capsid protein VP2 138951
112 6AJ0 2 B Virion protein 2 138951
113 6HBG 2 B Echovirus 18 viral protein 2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
114 6HBH 2 B Echovirus 18 capsid protein 2 138949
115 6HBJ 2 B Viral protein 2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
116 6HBK 3 B, E, H, K, N, Q, T, W, Z, c, f Echovirus 18 capsid protein 3 138949
117 6HBL 2 B, E, H, K, N, Q, T, W, Z, c, f, i, l, o, r Echovirus 18 capsid protein 2 138949
118 6ADR 3 B vp2 390157
119 6ADS 3 B VP2 390157
120 6ADT 3 B VP2 390157
121 6ADM 3 B VP2 390157
122 6ACY 2 B VP2 138948
123 6ACZ 2 B VP2 138948
124 6AD0 4 B VP2 138948
125 6ACU 2 B VP2 138948
126 6GZV 2 B Capsid protein VP2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
127 6DIZ 2 B VP2 138948
128 6DIJ 2 B VP2 138948
129 6CX1 3 C Capsid protein VP2 residues 162-429 390157
130 6CV1 3 C viral protein 2 UNP residues 1-248 138951
131 6CV2 3 C viral protein 2 UNP residues 1-248 138951
132 6CV3 3 C viral protein 2 UNP residues 1-248 138951
133 6CV4 3 C viral protein 2 UNP residues 1-248 138951
134 6CV5 3 C viral protein 2 UNP residues 1-248 138951
135 6CVB 3 C viral protein 2 UNP residues 1-248 138951
136 6CSA 3 C viral protein 2 UNP residues 70-317 138951
137 6CSG 3 C viral protein 2 UNP residues 70-317 138951
138 6CSH 3 C viral protein 2 UNP residues 70-317 138951
139 6CRP 3 C viral protein 2 UNP residues 70-317 138951
140 6CRR 3 C viral protein 2 UNP residues 70-317 138951
141 6CRS 3 C viral protein 2 UNP residues 70-317 138951
142 6CRU 3 C viral protein 2 UNP residues 70-317 138951
143 6CS3 3 C viral protein 2 UNP residues 70-317 138951
144 6CS4 3 C viral protein 2 UNP residues 70-317 138951
145 6CS5 3 C viral protein 2 UNP residues 70-317 138951
146 6CS6 3 C viral protein 2 UNP residues 70-317 138951
147 6EIT 2 2 VP2 138950
148 5XS4 2 B Genome polyprotein UNP residues 7-=325 138948
149 5XS7 4 B Genome polyprotein UNP residues 70-325 138948
150 5W3L 3 C viral protein 2 UNP residues 70-331 147712
151 5W3M 5 C viral protein 2 UNP residues 70-331 147712
152 5W3O 5 C viral protein 2 UNP residues 70-331 147712
153 5W3E 5 C viral protein 2 UNP residues 70-331 147712
154 5O5P 2 2 Capsid proteins, VP2 138950
155 5O5B 2 2 Capsid proteins 138950
156 5KWL 2 2 VP2 UNP residues 70-337 138950
157 5KTZ 2 2 VP2 UNP residues 70-338 138950
158 5KU0 2 2 VP2 UNP residues 70-338 138950
159 5KU2 2 2 VP2 UNP residues 70-337 138950
160 5K0U 3 C Capsid protein VP2 UNP residues 68-332 463676
161 3JD7 2 2 Capsid protein VP2 UNP residues 70-332 138949
162 3JBC 2 2 Capsid protein VP2 UNP residues 70-341 138950
163 3JBD 2 2 Capsid protein VP2 UNP residues 70-341 138950
164 3JBE 2 2 Capsid protein VP2 UNP residues 70-341 138950
165 3JBF 2 2 Capsid protein VP2 UNP residues 70-341 138950
166 3JBG 2 2 Capsid protein VP2 UNP residues 70-341 138950
167 5A8F 3 C HUMAN SAFFOLD VIRUS-3 VP2 1821750
168 3J9F 2 2 Protein VP2 UNP residues 70-341 138950
169 3J8F 2 2 Capsid protein VP2 UNP residues 70-341 138950
170 4C0U 2 B VP2 138948
171 4C0Y 2 B VP2 138948
172 4C10 4 B VP3 138948
173 3J48 2 2 Protein VP2 UNP residues 70-341 138950
174 4BIP 2 B VP2 138948
175 4BIQ 2 B VP2 HOMOLOGY MODEL OF COXSACKIEVIRUS A7 EMPTY CAPSID PROTEIN VP2 138948
176 3J3O 5 2 Protein VP2 UNP residues 70-341 138950
177 3J3P 4 2 Protein VP2 UNP residues 70-341 138950
178 3J2J 3 C Protein VP2 UNP residues 79-330 138949
179 3J22 2 B capsid protein VP0 UNP residues 82-318 138948
180 3J23 2 B capsid protein VP0 UNP residues 82-318 138948
181 3IYP 3 C Polyprotein 138949
182 3IYB 4 4 Genome polyprotein 138950 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
183 3IYC 4 4 Genome polyprotein 138950 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
184 3EPC 3 2 Protein VP2 138950
185 3EPD 4 2 protein VP2 138950
186 3EPF 3 2 Protein VP2 138950
187 2C8I 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
188 1Z7Z 2 2 human coxsackievirus A21 Viral Protein 2 residues 2010-2272 138950
189 1XYR 2 2 Genome polyprotein, Coat protein VP2 residues 96-332 138950
190 1UPN 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
191 1NN8 3 2 coat protein VP2 138950
192 1M11 3 2 COAT PROTEIN VP2 138949
193 1JEW 3 2 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP2 Residues 70-332 138949
194 1DGI 3 2 VP2 138950
195 1D3E 3 2 PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP2) 169066
196 1D3I 3 2 PROTEIN (RHINOVIRUS 14 COAT PROTEIN VP2) 169066
197 1VRH 2 2 RHINOVIRUS 14 147712
198 1RUC 2 2 RHINOVIRUS 14 147712
199 1RUD 2 2 RHINOVIRUS 14 147712
200 1RUE 2 2 RHINOVIRUS 14 147712
201 1RUF 2 2 RHINOVIRUS 14 147712
202 1RUG 2 2 RHINOVIRUS 14 147712
203 1RUH 2 2 RHINOVIRUS 14 147712
204 1RUI 2 2 RHINOVIRUS 14 147712
205 1RUJ 2 2 RHINOVIRUS 14 147712
206 1HRV 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
207 2HWB 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
208 2HWC 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
209 2HWD 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
210 2HWE 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
211 2HWF 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
212 1HRI 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
213 1TMF 2 2 THEILER'S MURINE ENCEPHALOMYELITIS VIRUS (SUBUNIT VP2) 1821750
214 1MEC 2 2 MENGO VIRUS COAT PROTEIN (SUBUNIT VP2) 1821749
215 1R09 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
216 1R08 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
217 1RMU 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
218 2R04 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
219 2R06 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
220 2R07 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
221 2RM2 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
222 2RMU 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
223 2RR1 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
224 2RS1 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 169066
225 2RS3 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
226 2RS5 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712