Sequence Similarity Clusters for the Entities in PDB 6ILL

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 15256
95 % 1 6 15756
90 % 1 6 14172
70 % 8 16 4790
50 % 11 29 822
40 % 87 167 229
30 % 94 204 213
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 12551
95 % 1 7 12399
90 % 1 7 12249
70 % 11 31 761
50 % 87 204 200
40 % 87 204 212
30 % 92 217 215
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 15404
95 % 1 7 12458
90 % 1 7 12311
70 % 11 31 765
50 % 96 216 179
40 % 96 218 191
30 % 117 259 126
Entity #4 | Chains: D
Capsid protein VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46470
95 % 3 8 9625
90 % 10 20 3814
70 % 40 94 616
50 % 72 141 431
40 % 72 141 452
30 % 72 141 473

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Q4W 2 2 Coxsackievirus capsid protein VP2 138950
2 4Q4X 2 2 Coxsackievirus capsid protein VP2 138950
3 4Q4Y 2 2 Coxsackievirus capsid protein VP2 138950
4 1AYM 2 2 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
5 4WM8 2 B VP2 138951
6 5BNP 2 B Capsid protein VP2 UNP residues 70-317 138951
7 3VBH 2 B Genome polyprotein, capsid protein VP2 138948
8 1PVC 3 2 POLIOVIRUS TYPE 3, SABIN STRAIN P3/SABIN P3/LEON/12A(1)B 138950
9 5BNO 2 B Capsid protein VP2 UNP residues 70-317 138951
10 1FPN 2 2 COAT PROTEIN VP2 147711
11 1ND2 2 B coat protein VP2 147711
12 4WM7 2 B VP2 138951
13 1HXS 2 2 GENOME POLYPROTEIN, COAT PROTEIN VP2 RESIDUES 69-340 138950
14 5BNN 2 B Capsid protein VP2 UNP residues 70-317 138951
15 1NCQ 2 B COAT PROTEIN VP2 147712
16 1D4M 2 2 PROTEIN (COXSACKIEVIRUS A9) VP2 138949
17 4RHV 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
18 1EAH 2 2 POLIOVIRUS TYPE 2 COAT PROTEINS VP1 TO VP4 138950
19 4Q4V 2 2 Coxsackievirus capsid protein VP2 138950
20 1K5M 2 B CHIMERA OF HRV14 COAT PROTEIN VP2 (P1B) AND the V3 loop of HIV-1 gp120 THE CHIMERA CONSISTS OF THE HRV14 COAT PROTEIN VP2 (P1B) AND RESIDUES 314-325 OF HIV-1 gp120. 147712
21 1QJU 2 2 PROTEIN VP2 RESIDUES 70-330 147711
22 3VBF 2 B Genome Polyprotein, capsid protein VP2 STRAIN FUYANG, ANHUI. P.R.C/17.08/1 138948
23 2PLV 2 2 HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2) 138950
24 4PDW 2 B Genome polyprotein resdiues 70-331 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
25 4CDQ 2 B VP2 138948
26 3ZFE 2 B VP2 VIRION OF HUMAN ENTEROVIRUS 71 138948
27 1QJX 2 2 PROTEIN VP2 RESIDUES 70-330 147711
28 1QJY 2 2 PROTEIN VP2 RESIDUES 70-330 147711
29 1NCR 2 B coat protein VP2 147711
30 3VBO 2 B Genome Polyprotein, capsid protein VP2 138948
31 1AYN 2 2 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
32 1C8M 2 2 HUMAN RHINOVIRUS 16 COAT PROTEIN RESIDUES 79-330 147711
33 1AR7 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
34 1ND3 2 B coat protein VP2 147711
35 1BEV 2 2 BOVINE ENTEROVIRUS COAT PROTEINS VP1 TO VP4 12064
36 4JGY 2 B Polyprotein, capsid protein VP2 STRAIN NINGBO.CHN/028-2/2009 138948
37 1AL2 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
38 1PO1 3 2 POLIOVIRUS TYPE 1 MAHONEY 138950
39 1AR9 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
40 5C4W 2 B VP2 138948
41 1H8T 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
42 1PO2 3 2 POLIOVIRUS TYPE 1 MAHONEY 138950
43 1ASJ 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
44 1Z7S 2 2 Human COXSACKIEVIRUS A21 Viral Protein 2 138950
45 1OOP 2 B Coat protein VP2 138949
46 4CDX 2 B VP2 138948
47 3VDD 2 B Protein VP2 UNP residues 70-330 147711
48 1NA1 2 B Coat protein VP2 147712
49 4CDU 2 B VP2 138948
50 1VBB 3 2 POLIOVIRUS TYPE 3 138950
51 1AR6 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
52 1AR8 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
53 4N53 2 B Capsid protein VP2 138948
54 4CDW 2 B VP2 138948
55 4CEY 2 B VP2 138948
56 1VBC 3 2 POLIOVIRUS TYPE 3 138950
57 3TN9 2 2 Protein VP2 147711
58 3ZFG 2 B VP2 VIRION OF HUMAN ENTEROVIRUS 71 138948
59 1VBE 3 2 POLIOVIRUS TYPE 3 138950
60 4CEW 2 B VP2 138948
61 3VBS 2 B Genome Polyprotein, capsid protein VP2 138948
62 5ABJ 2 B VP2 UNP RESIDUES 70-323 138948
63 1VBD 3 2 POLIOVIRUS TYPE 1 MAHONEY P1/MAHONEY 138950
64 3ZFF 2 B VP2 138948
65 1RHI 2 2 HUMAN RHINOVIRUS 3 COAT PROTEIN 147712
66 1VBA 3 2 POLIOVIRUS TYPE 3 138950
67 4JGZ 2 B Polyprotein, capsid protein VP2 STRAIN NINGBO.CHN/028-2/2009 138948
68 1MQT 2 B Polyprotein Capsid Protein SVDV COAT PROTEIN VP2 138949
69 1RVF 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN 147712
70 4GB3 2 2 coat protein 2 UNP residues 70-332 138949
71 2X5I 2 B VP2 138949
72 1PIV 3 2 POLIOVIRUS TYPE 3 (SUBUNIT VP2) 138950
73 1COV 2 2 COXSACKIEVIRUS COAT PROTEIN 138949
74 1R1A 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
75 1EV1 2 2 ECHOVIRUS 1 VP1, VP2, VP3, VP4 138949
76 4N43 2 B Capsid protein VP2 EV71 capsid protein VP2 138948
77 3VBR 2 B Genome Polyprotein, capsid protein VP0 138948
78 1V9U 2 2 Coat protein VP2 147711
79 4AED 2 B VP2 138948
80 3VBU 2 B Genome Polyprotein, capsid protein VP0 138948
81 3DPR 2 B Protein VP2 147711
82 4L3B 2 B Protein VP2 UNP residues 70-330 147711
83 6RJF 2 2 VP2 138949
84 6O06 2 B VP2 UNP residues 77-330 138949
85 6MZI 3 C viral protein 2 UNP residues 70-317 138951
86 6I2K 2 B Polyprotein 138948
87 6ILL 2 B Capsid protein VP2 138949
88 6ILM 2 B Capsid protein VP2 138949
89 6ILN 2 B Capsid protein VP2 138949
90 6ILO 2 B Capsid protein VP2 138949
91 6ILP 2 B Capsid protein VP2 138949
92 6ILJ 2 B Capsid protein VP2 138949
93 6ILK 2 B Capsid protein VP2 138949
94 6IIJ 2 B VP2 138948
95 6AKS 2 B VP2 138948
96 6AKT 2 B VP2 138948
97 6AKU 2 B VP2 138948
98 6HHT 2 B1, B2, E1, E2, H1, H2, K1, K2, N1, N2, Q1, Q2, T1, T2, W1, W2, Z2, c2, f2, i2, l2, o2, r2, u2, x2 Echovirus 18 capsid protein 2 138949
99 6AJ7 4 B Capsid protein VP2 138951
100 6AJ9 6 B Capsid protein VP2 138951
101 6AJ2 2 B Capsid protein VP2 138951
102 6AJ3 2 B Capsid protein VP2 138951
103 6AJ0 2 B Virion protein 2 138951
104 6HBG 2 B Echovirus 18 viral protein 2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
105 6HBH 2 B Echovirus 18 capsid protein 2 138949
106 6HBJ 2 B Viral protein 2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
107 6HBK 3 B, E, H, K, N, Q, T, W, Z, c, f Echovirus 18 capsid protein 3 138949
108 6HBL 2 B, E, H, K, N, Q, T, W, Z, c, f, i, l, o, r Echovirus 18 capsid protein 2 138949
109 6ACY 2 B VP2 138948
110 6ACZ 2 B VP2 138948
111 6AD0 4 B VP2 138948
112 6ACU 2 B VP2 138948
113 6GZV 2 B Capsid protein VP2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
114 6DIZ 2 B VP2 138948
115 6DIJ 2 B VP2 138948
116 6CSA 3 C viral protein 2 UNP residues 70-317 138951
117 6CSG 3 C viral protein 2 UNP residues 70-317 138951
118 6CSH 3 C viral protein 2 UNP residues 70-317 138951
119 6CRP 3 C viral protein 2 UNP residues 70-317 138951
120 6CRR 3 C viral protein 2 UNP residues 70-317 138951
121 6CRS 3 C viral protein 2 UNP residues 70-317 138951
122 6CRU 3 C viral protein 2 UNP residues 70-317 138951
123 6CS3 3 C viral protein 2 UNP residues 70-317 138951
124 6CS4 3 C viral protein 2 UNP residues 70-317 138951
125 6CS5 3 C viral protein 2 UNP residues 70-317 138951
126 6CS6 3 C viral protein 2 UNP residues 70-317 138951
127 6EIT 2 2 VP2 138950
128 5OSN 2 B Capsid protein 12064
129 5XS4 2 B Genome polyprotein UNP residues 7-=325 138948
130 5XS7 4 B Genome polyprotein UNP residues 70-325 138948
131 5W3L 3 C viral protein 2 UNP residues 70-331 147712
132 5W3M 5 C viral protein 2 UNP residues 70-331 147712
133 5W3O 5 C viral protein 2 UNP residues 70-331 147712
134 5W3E 5 C viral protein 2 UNP residues 70-331 147712
135 5O5P 2 2 Capsid proteins, VP2 138950
136 5O5B 2 2 Capsid proteins 138950
137 5KWL 2 2 VP2 UNP residues 70-337 138950
138 5KTZ 2 2 VP2 UNP residues 70-338 138950
139 5KU0 2 2 VP2 UNP residues 70-338 138950
140 5KU2 2 2 VP2 UNP residues 70-337 138950
141 5K0U 3 C Capsid protein VP2 UNP residues 68-332 463676
142 3JD7 2 2 Capsid protein VP2 UNP residues 70-332 138949
143 3JBC 2 2 Capsid protein VP2 UNP residues 70-341 138950
144 3JBD 2 2 Capsid protein VP2 UNP residues 70-341 138950
145 3JBE 2 2 Capsid protein VP2 UNP residues 70-341 138950
146 3JBF 2 2 Capsid protein VP2 UNP residues 70-341 138950
147 3JBG 2 2 Capsid protein VP2 UNP residues 70-341 138950
148 3J9F 2 2 Protein VP2 UNP residues 70-341 138950
149 3J8F 2 2 Capsid protein VP2 UNP residues 70-341 138950
150 4C0U 2 B VP2 138948
151 4C0Y 2 B VP2 138948
152 4C10 4 B VP3 138948
153 3J48 2 2 Protein VP2 UNP residues 70-341 138950
154 4BIP 2 B VP2 138948
155 4BIQ 2 B VP2 HOMOLOGY MODEL OF COXSACKIEVIRUS A7 EMPTY CAPSID PROTEIN VP2 138948
156 3J3O 5 2 Protein VP2 UNP residues 70-341 138950
157 3J3P 4 2 Protein VP2 UNP residues 70-341 138950
158 3J2J 3 C Protein VP2 UNP residues 79-330 138949
159 3J22 2 B capsid protein VP0 UNP residues 82-318 138948
160 3J23 2 B capsid protein VP0 UNP residues 82-318 138948
161 3IYP 3 C Polyprotein 138949
162 3IYB 4 4 Genome polyprotein 138950 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
163 3IYC 4 4 Genome polyprotein 138950 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
164 3EPC 3 2 Protein VP2 138950
165 3EPD 4 2 protein VP2 138950
166 3EPF 3 2 Protein VP2 138950
167 2C8I 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
168 1Z7Z 2 2 human coxsackievirus A21 Viral Protein 2 residues 2010-2272 138950
169 1XYR 2 2 Genome polyprotein, Coat protein VP2 residues 96-332 138950
170 1UPN 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
171 1NN8 3 2 coat protein VP2 138950
172 1M11 3 2 COAT PROTEIN VP2 138949
173 1JEW 3 2 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP2 Residues 70-332 138949
174 1DGI 3 2 VP2 138950
175 1D3E 3 2 PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP2) 169066
176 1D3I 3 2 PROTEIN (RHINOVIRUS 14 COAT PROTEIN VP2) 169066
177 1VRH 2 2 RHINOVIRUS 14 147712
178 1RUC 2 2 RHINOVIRUS 14 147712
179 1RUD 2 2 RHINOVIRUS 14 147712
180 1RUE 2 2 RHINOVIRUS 14 147712
181 1RUF 2 2 RHINOVIRUS 14 147712
182 1RUG 2 2 RHINOVIRUS 14 147712
183 1RUH 2 2 RHINOVIRUS 14 147712
184 1RUI 2 2 RHINOVIRUS 14 147712
185 1RUJ 2 2 RHINOVIRUS 14 147712
186 1HRV 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
187 2HWB 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
188 2HWC 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
189 2HWD 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
190 2HWE 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
191 2HWF 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
192 1HRI 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
193 1R09 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
194 1R08 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
195 1RMU 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
196 2R04 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
197 2R06 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
198 2R07 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
199 2RM2 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
200 2RMU 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
201 2RR1 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
202 2RS1 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 169066
203 2RS3 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
204 2RS5 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712