Sequence Similarity Clusters for the Entities in PDB 6ILL

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 16680
95 % 1 6 14967
90 % 1 6 14698
70 % 8 16 5040
50 % 11 29 861
40 % 98 213 202
30 % 98 213 214
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 13304
95 % 1 7 13046
90 % 1 7 12888
70 % 11 31 807
50 % 91 213 202
40 % 91 213 215
30 % 96 226 217
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 14743
95 % 1 7 12858
90 % 1 7 12762
70 % 11 31 815
50 % 100 225 180
40 % 100 227 192
30 % 121 268 129
Entity #4 | Chains: D
Capsid protein VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 53726
95 % 3 8 10074
90 % 10 20 4009
70 % 42 96 648
50 % 76 148 431
40 % 76 148 452
30 % 76 148 468

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6ILL 3 C Capsid protein VP3 138949
2 6ILM 3 C Capsid protein VP3 138949
3 6ILN 3 C Capsid protein VP3 138949
4 6ILP 3 C Capsid protein VP3 138949
5 6ILJ 3 C Capsid protein VP3 138949
6 6ILK 3 C Capsid protein VP3 138949