Sequence Similarity Clusters for the Entities in PDB 6ILL

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 16680
95 % 1 6 14967
90 % 1 6 14698
70 % 8 16 5040
50 % 11 29 861
40 % 98 213 202
30 % 98 213 214
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 13304
95 % 1 7 13046
90 % 1 7 12888
70 % 11 31 807
50 % 91 213 202
40 % 91 213 215
30 % 96 226 217
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 14743
95 % 1 7 12858
90 % 1 7 12762
70 % 11 31 815
50 % 100 225 180
40 % 100 227 192
30 % 121 268 129
Entity #4 | Chains: D
Capsid protein VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 53726
95 % 3 8 10074
90 % 10 20 4009
70 % 42 96 648
50 % 76 148 431
40 % 76 148 452
30 % 76 148 468

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Q4W 3 3 Coxsackievirus capsid protein VP3 138950
2 4Q4X 3 3 Coxsackievirus capsid protein VP3 138950
3 4Q4Y 3 3 Coxsackievirus capsid protein VP3 138950
4 1QQP 3 3 PROTEIN (GENOME POLYPROTEIN) STRAIN BFS, 1860 12110
5 1ZBA 3 3 Coat protein VP3 12110
6 4IV1 3 C Capsid protein VP3 UNP RESIDUES 505-725 12110
7 5C8C 3 C VP3 138948
8 1AYM 3 3 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
9 4WM8 3 C VP3 138951
10 5NE4 3 3 Polyprotein 12110
11 5BNP 3 C Capsid protein VP3 UNP residues 318-564 138951
12 3VBH 3 C Genome Polyprotein, vapsid protein VP3 138948
13 1BBT 3 3 FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP3) 12110
14 1PVC 4 3 POLIOVIRUS TYPE 3, SABIN STRAIN P3/SABIN P3/LEON/12A(1)B 138950
15 5BNO 3 C Capsid protein VP3 UNP residues 318-564 138951
16 5D8A 3 C VP3 12110
17 1FPN 3 3 COAT PROTEIN VP3 147711
18 5OSN 3 C Capsid protein 12064
19 1ND2 3 C coat protein VP3 147711
20 4WM7 3 C VP3 138951
21 1HXS 3 3 GENOME POLYPROTEIN, COAT PROTEIN VP3 RESIDUES 341-577 138950
22 5BNN 3 C Capsid protein VP3 UNP residues 318-564 138951
23 5CFD 2 B VP3 1821750
24 1NCQ 3 C COAT PROTEIN VP3 147712
25 5CFC 2 B VP3 residues 415-646 1821750
26 3CJI 2 B Polyprotein sequence database residues 151-434 390157
27 1FOD 3 3 FOOT AND MOUTH DISEASE VIRUS 12110
28 1D4M 3 3 PROTEIN (COXSACKIEVIRUS A9) VP3 138949
29 4RHV 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
30 4GH4 3 C capsid protein VP3 UNP residues 219-439 12110
31 1EAH 3 3 POLIOVIRUS TYPE 2 COAT PROTEINS VP1 TO VP4 138950
32 4Q4V 3 3 Coxsackievirus capsid protein VP3 138950
33 1K5M 3 C COAT PROTEIN VP3 (P1C) 147712
34 1QJU 3 3 PROTEIN VP3 RESIDUES 331-568 147711
35 3VBF 3 C Genome Polyprotein, capsid protein VP3 STRAIN FUYANG, ANHUI. P.R.C/17.08/1 138948
36 2PLV 3 3 HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3) 138950
37 4PDW 3 C Genome polyprotein resdiues 332-657 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
38 4CDQ 3 C VP3 138948
39 3ZFE 3 C VP3 VIRION OF HUMAN ENTEROVIRUS 71 138948
40 1QJX 3 3 PROTEIN VP3 RESIDUES 331-568 147711
41 1QJY 3 3 PROTEIN VP3 RESIDUES 331-568 147711
42 1NCR 3 C coat protein VP3 147711
43 3VBO 3 C Genome Polyprotein, capsid protein VP3 138948
44 1ZBE 3 3 Coat protein VP3 12110
45 1AYN 3 3 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
46 1C8M 3 3 HUMAN RHINOVIRUS 16 COAT PROTEIN RESIDUES 331-568 147711
47 2MEV 3 3 MENGO VIRUS COAT PROTEIN (SUBUNIT VP3) 1821749
48 1AR7 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
49 1ND3 3 C coat protein VP3 147711
50 4IV3 3 C Capsid protein VP3 UNP RESIDUES 505-725 12110
51 1BEV 3 3 BOVINE ENTEROVIRUS COAT PROTEINS VP1 TO VP4 12064
52 4JGY 3 C Polyprotein, capsid protein VP3 STRAIN NINGBO.CHN/028-2/2009 138948
53 1AL2 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
54 1PO1 4 3 POLIOVIRUS TYPE 1 MAHONEY 138950
55 2WZR 3 3 POLYPROTEIN RESIDUES 504-724 12110
56 1AR9 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
57 4RQP 2 B, F, J, N, R Capsid protein VP3 138948
58 5C4W 3 C VP3 138948
59 1H8T 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
60 1PO2 4 3 POLIOVIRUS TYPE 1 MAHONEY 138950
61 1ASJ 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
62 1Z7S 3 3 Human coxsackievirus A21 Viral Protein 3 138950
63 1OOP 3 C Coat protein VP3 138949
64 4CDX 3 C VP3 138948
65 4RR3 2 B, F, J, N, R Capsid protein VP3 138948
66 1FMD 3 3 FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP3) 12110
67 3VDD 3 C Protein VP3 UNP residues 331-567 147711
68 1NA1 3 C Coat protein VP3 147712
69 5C9A 3 C VP3 138948
70 4CDU 3 C VP3 138948
71 1VBB 4 3 POLIOVIRUS TYPE 3 138950
72 1POV 3 3 POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) 138950
73 1AR6 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
74 1AR8 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
75 4N53 3 C Capsid protein VP3 138948
76 4CDW 3 C VP3 138948
77 4CEY 3 C VP3 138948
78 1VBC 4 3 POLIOVIRUS TYPE 3 138950
79 3TN9 3 3 Protein VP3 147711
80 3ZFG 3 C VP3 VIRION OF HUMAN ENTEROVIRUS 71 138948
81 1VBE 4 3 POLIOVIRUS TYPE 3 138950
82 4CEW 3 C VP3 138948
83 3VBS 3 C Genome Polyprotein, capsid protein VP3 138948
84 5ABJ 3 C VP3 UNP RESIDUES 324-565 138948
85 2WS9 3 3 P1 CAPSID PROTEIN VP3, RESIDUES 311-536 47000
86 1VBD 4 3 POLIOVIRUS TYPE 1 MAHONEY P1/MAHONEY 138950
87 1TME 3 3 THEILER'S MURINE ENCEPHALOMYELITIS VIRUS (SUBUNIT VP3) 1821750
88 3ZFF 3 C VP3 138948
89 1RHI 3 3 HUMAN RHINOVIRUS 3 COAT PROTEIN 147712
90 1VBA 4 3 POLIOVIRUS TYPE 3 138950
91 4JGZ 3 C Polyprotein, capsid protein VP3 STRAIN NINGBO.CHN/028-2/2009 138948
92 1MQT 3 C Polyprotein Capsid Protein SVDV COAT PROTEIN VP3 138949
93 1RVF 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN 147712
94 4GB3 3 3 coat protein 3 UNP residues 333-570 138949
95 2X5I 3 C VP3 138949
96 1PIV 4 3 POLIOVIRUS TYPE 3 (SUBUNIT VP3) 138950
97 1COV 3 3 COXSACKIEVIRUS COAT PROTEIN 138949
98 1R1A 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
99 1EV1 3 3 ECHOVIRUS 1 VP1, VP2, VP3, VP4 138949
100 4N43 3 C Capsid protein VP3 EV71 capsid protein VP3 138948
101 3VBR 3 C Genome Polyprotein, capsid protein VP3 138948
102 2XBO 3 3 P1 CAPSID PROTEIN VP3, RESIDUES 311-536 47000
103 4YVS 2 B, E, H, K, N Capsid protein VP3 138948
104 1V9U 3 3 Coat protein VP3 147711
105 4RS5 1 B, E, H, K, N Capsid protein VP3 138948
106 4GMP 3 3 capsid protein VP3 UNP residues 324-565 138948
107 4AED 3 C VP3 138948
108 3VBU 3 C Genome Polyprotein, capsid protein VP3 138948
109 4YVW 2 B, F, H, K, N Capsid protein VP3 138948
110 5DDJ 3 3 Foot and mouth disease virus, VP3 12110
111 3DPR 3 C Protein VP3 147711
112 4L3B 3 C Protein VP3 UNP residues 331-567 147711
113 2WFF 3 3 P1 CAPSID PROTEIN VP3, RESIDUES 311-536 47000
114 6SK5 4 C Rhinovirus B5 VP3 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
115 6SK6 4 C Rhinovirus B5 VP3 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
116 6SK7 3 C VP3 capsid protein 147711 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
117 6RJF 3 3 VP3 138949
118 6O06 3 C VP3 UNP residues 331-569 138949
119 6MZI 2 B viral protein 3 UNP residues 318-564 138951
120 6I2K 3 C Polyprotein 138948
121 6ILL 3 C Capsid protein VP3 138949
122 6ILM 3 C Capsid protein VP3 138949
123 6ILN 3 C Capsid protein VP3 138949
124 6ILO 3 C Capsid protein VP3 138949
125 6ILP 3 C Capsid protein VP3 138949
126 6ILJ 3 C Capsid protein VP3 138949
127 6ILK 3 C Capsid protein VP3 138949
128 6IIO 3 C VP3 138948
129 6IIJ 3 C VP3 138948
130 6AKS 3 C VP3 138948
131 6AKT 3 C VP3 138948
132 6AKU 3 C VP3 138948
133 6HHT 3 C1, C2, F1, F2, I1, I2, L1, L2, O1, O2, R1, R2, U1, U2, X1, X2, a2, d2, g2, j2, m2, p2, s2, v2, y2 Echovirus 18 capsid protein 3 138949
134 6AJ7 5 C Capsid protein VP3 138951
135 6AJ9 7 C Capsid protein VP3 138951
136 6AJ2 3 C Capsid protein VP3 138951
137 6AJ3 3 C Capsid protein VP3 138951
138 6AJ0 3 C Capsid protein VP3 138951
139 6HBG 3 C Echovirus 18 viral protein 3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
140 6HBH 3 C Echovirus 18 capsid protein 3 138949
141 6HBJ 3 C Viral protein 3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
142 6HBK 2 C, F, I, L, O, R, U, X, a, d, g Echovirus 18 capsid protein 2 138949
143 6HBL 3 C, F, I, L, O, R, U, X, a, d, g, j, m, p, s Echovirus 18 capsid protein 3 138949
144 6ADR 2 C VP3 390157
145 6ADS 2 C VP3 390157
146 6ADT 2 C VP3 390157
147 6ADM 2 C VP3 390157
148 6ACY 3 C VP3 138948
149 6ACZ 3 C VP3 138948
150 6AD0 5 C VP3 138948
151 6AD1 3 C VP3 138948
152 6ACU 3 C VP3 138948
153 6ACW 3 C VP3 138948
154 6GZV 3 C Capsid protein VP3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
155 6DIZ 3 C VP3 138948
156 6DIJ 3 C VP3 138948
157 6CX1 4 B Capsid protein VP3 residues 435-672 390157
158 6CV1 2 B viral protein 3 UNP residues 1-247 138951
159 6CV2 2 B viral protein 3 UNP residues 1-247 138951
160 6CV3 2 B viral protein 3 UNP residues 1-247 138951
161 6CV4 2 B viral protein 3 UNP residues 1-247 138951
162 6CV5 2 B viral protein 3 UNP residues 1-247 138951
163 6CVB 2 B viral protein 3 UNP residues 1-247 138951
164 6CSA 2 B viral protein 3 UNP residues 318-564 138951
165 6CSG 2 B viral protein 3 UNP residues 318-564 138951
166 6CSH 2 B viral protein 3 UNP residues 318-564 138951
167 6CRP 2 B viral protein 3 UNP residues 318-564 138951
168 6CRR 2 B viral protein 3 UNP residues 318-564 138951
169 6CRS 2 B viral protein 3 UNP residues 318-564 138951
170 6CRU 2 B viral protein 3 UNP residues 318-564 138951
171 6CS3 2 B viral protein 3 UNP residues 318-564 138951
172 6CS4 2 B viral protein 3 UNP residues 318-564 138951
173 6CS5 2 B viral protein 3 UNP residues 318-564 138951
174 6CS6 2 B viral protein 3 UNP residues 318-564 138951
175 5YHQ 2 C Capsid protein VP3 UNP RESIDUES 326-565 138948
176 6EIT 3 3 VP3 138950
177 5OYI 3 3, C, F, I, L Genome polyprotein 12110 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.46 | Details 3.6.1.15 | Details
178 5OWX 3 3 Genome polyprotein 12110 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.46 | Details 3.6.1.15 | Details
179 5XS4 3 C Genome polyprotein UNP residues 326-565 138948
180 5XS5 3 C Genome polyprotein UNP residues 326-565 138948
181 5XS7 5 C Genome polyprotein UNP residues 326-565 138948
182 5W3L 2 B viral protein 3 UNP residues 332-567 147712
183 5W3M 4 B viral protein 3 UNP residues 332-567 147712
184 5W3O 4 B viral protein 3 UNP residues 332-567 147712
185 5W3E 4 B viral protein 3 UNP residues 332-567 147712
186 5O5P 3 3 Capsid proteins, VP3 138950
187 5O5B 3 3 Capsid proteins 138950
188 5NER 3 3 O PanAsia VP3 12110
189 5NET 3 3 O1 Manisa VP3 12110
190 5NEU 3 3 Capsid protein 12110
191 5NED 3 C O PanAsia VP3 12110
192 5NEJ 3 3 O1 Manisa VP3 12110
193 5NEM 3 3 O PanAsia VP3 12110
194 5TSL 1 C coxsackievirus A16 138948
195 5KWL 3 3 VP3 UNP residues 342-571 138950
196 5KTZ 3 3 Genome polyprotein UNP residues 342-572 138950
197 5KU0 3 3 VP3 UNP residues 342-571 138950
198 5KU2 3 3 VP3 UNP residues 342-571 138950
199 5K0U 2 B Capsid protein VP3 UNP residues 333-567 463676
200 5JZG 2 B Capsid protein VP3 UNP residues 333-567 463676
201 3JD7 3 3 Capsid protein VP3 UNP residues 333-570 138949
202 3JBC 3 3 Capsid protein VP3 UNP residues 342-578 138950
203 3JBD 3 3 Capsid protein VP3 UNP residues 342-578 138950
204 3JBE 3 3 Capsid protein VP3 UNP residues 342-578 138950
205 3JBF 3 3 Capsid protein VP3 UNP residues 342-578 138950
206 3JBG 3 3 Capsid protein VP3 UNP residues 342-578 138950
207 5AC9 3 3 VP2 FMDV O1 MANISA SEROTYPE WITH A MUTATION AT VP2 S93Y 12110
208 5ACA 3 3 VP3 12110
209 3J9F 3 3 Protein VP3 UNP residues 342-579 138950
210 3J91 3 3 VP3 UNP residues 324-565 138948
211 3J8F 3 3 Capsid protein VP3 UNP residues 342-579 138950
212 4CTF 3 D0, D1, D2, D3, D4, D5, D6, D7, D8, D9, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, DL, DM, DN, DO, DP, DQ, DR, DS, DT, DU, DV, DW, DX, DY, DZ, Da, Db, Dc, Dd, De, Df, Dg, Dh, Di, Dj, Dk, Dl, Dm, Dn, Do, Dp, Dq, Dr, Ds, EA, EB, EC, ED, EE P1 RESIDUES 311-536 47000
213 4CTG 3 C0, C1, C2, C3, C4, C5, C6, C7, C8, C9, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, CL, CM, CN, CO, CP, CQ, CR, CS, CT, CU, CV, CW, CX, CY, CZ, Cc, Cd, Ce, Cf, Cg, Ch, Ci, Cj, Ck, Cl, Cm, Cn, Co, Cp, Cq, Cr, Cs, Ct, Cu, Cv, Cw, Cx, DA, DB P1 RESIDUES 311-536 47000
214 4C0U 3 C VP3 138948
215 4C0Y 3 C VP3 138948
216 4C10 5 C VP2 138948
217 3J48 3 3 Protein VP3 UNP residues 342-579 138950
218 3J3O 6 3 Protein VP3 UNP residues 342-579 138950
219 3J3P 5 3 Protein VP3 UNP residues 342-579 138950
220 3J2J 2 B Protein VP3 UNP residues 331-568 138949
221 3J22 3 C capsid protein VP3 UNP residues 324-562 138948
222 3J23 3 C capsid protein VP3 UNP residues 324-562 138948
223 3IYP 2 B Polyprotein 138949
224 3IYB 3 3 Precursor polyprotein 138950
225 3IYC 3 3 Precursor polyprotein 138950
226 3EPC 5 3 Protein VP3 138950
227 3EPD 6 3 protein VP3 138950
228 3EPF 5 3 Protein VP3 138950
229 2C8I 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
230 1Z7Z 3 3 human coxsackievirus A21 Viral Protein 3 residues 3043-3234 138950
231 1UPN 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
232 1NN8 4 3 coat protein VP3 138950
233 1M11 4 3 COAT PROTEIN VP3 138949
234 1JEW 4 3 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP3 Residues 333-570 138949
235 1DGI 4 3 VP3 138950
236 1D3E 4 3 PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP3) 169066
237 1D3I 4 3 PROTEIN (RHINOVIRUS 14 COAT PROTEIN VP3) 169066
238 1QGC 3 3 PROTEIN (VIRUS CAPSID PROTEIN VP3) 12110
239 1VRH 3 3 RHINOVIRUS 14 147712
240 1RUC 3 3 RHINOVIRUS 14 147712
241 1RUD 3 3 RHINOVIRUS 14 147712
242 1RUE 3 3 RHINOVIRUS 14 147712
243 1RUF 3 3 RHINOVIRUS 14 147712
244 1RUG 3 3 RHINOVIRUS 14 147712
245 1RUH 3 3 RHINOVIRUS 14 147712
246 1RUI 3 3 RHINOVIRUS 14 147712
247 1RUJ 3 3 RHINOVIRUS 14 147712
248 1HRV 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
249 2HWB 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
250 2HWC 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
251 2HWD 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
252 2HWE 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
253 2HWF 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
254 1HRI 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
255 1TMF 3 3 THEILER'S MURINE ENCEPHALOMYELITIS VIRUS (SUBUNIT VP3) 1821750
256 1MEC 3 3 MENGO VIRUS COAT PROTEIN (SUBUNIT VP1) 1821749
257 1R09 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
258 1R08 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
259 1RMU 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
260 2R04 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
261 2R06 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
262 2R07 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
263 2RM2 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
264 2RMU 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
265 2RR1 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
266 2RS1 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
267 2RS3 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
268 2RS5 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712