Sequence Similarity Clusters for the Entities in PDB 6ILL

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 15327
95 % 1 6 14680
90 % 1 6 14444
70 % 8 16 4806
50 % 11 29 833
40 % 87 167 233
30 % 94 206 211
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 12534
95 % 1 7 12332
90 % 1 7 12200
70 % 11 31 758
50 % 87 204 202
40 % 87 204 214
30 % 92 217 215
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 13213
95 % 1 7 11980
90 % 1 7 11749
70 % 11 31 760
50 % 96 216 180
40 % 96 218 191
30 % 117 259 129
Entity #4 | Chains: D
Capsid protein VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46630
95 % 3 8 9648
90 % 10 20 3817
70 % 29 79 764
50 % 72 141 431
40 % 72 141 452
30 % 72 141 473

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Q4W 3 3 Coxsackievirus capsid protein VP3 138950
2 4Q4X 3 3 Coxsackievirus capsid protein VP3 138950
3 4Q4Y 3 3 Coxsackievirus capsid protein VP3 138950
4 1QQP 3 3 PROTEIN (GENOME POLYPROTEIN) STRAIN BFS, 1860 12110
5 1ZBA 3 3 Coat protein VP3 12110
6 4IV1 3 C Capsid protein VP3 UNP RESIDUES 505-725 12110
7 5C8C 3 C VP3 138948
8 1AYM 3 3 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
9 4WM8 3 C VP3 138951
10 5NE4 3 3 Polyprotein 12110
11 5BNP 3 C Capsid protein VP3 UNP residues 318-564 138951
12 3VBH 3 C Genome Polyprotein, vapsid protein VP3 138948
13 1BBT 3 3 FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP3) 12110
14 1PVC 4 3 POLIOVIRUS TYPE 3, SABIN STRAIN P3/SABIN P3/LEON/12A(1)B 138950
15 5BNO 3 C Capsid protein VP3 UNP residues 318-564 138951
16 5D8A 3 C VP3 12110
17 1FPN 3 3 COAT PROTEIN VP3 147711
18 1ND2 3 C coat protein VP3 147711
19 4WM7 3 C VP3 138951
20 1HXS 3 3 GENOME POLYPROTEIN, COAT PROTEIN VP3 RESIDUES 341-577 138950
21 5BNN 3 C Capsid protein VP3 UNP residues 318-564 138951
22 5CFD 2 B VP3 1821750
23 1NCQ 3 C COAT PROTEIN VP3 147712
24 5CFC 2 B VP3 residues 415-646 1821750
25 3CJI 2 B Polyprotein sequence database residues 151-434 390157
26 1FOD 3 3 FOOT AND MOUTH DISEASE VIRUS 12110
27 1D4M 3 3 PROTEIN (COXSACKIEVIRUS A9) VP3 138949
28 4RHV 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
29 4GH4 3 C capsid protein VP3 UNP residues 219-439 12110
30 1EAH 3 3 POLIOVIRUS TYPE 2 COAT PROTEINS VP1 TO VP4 138950
31 4Q4V 3 3 Coxsackievirus capsid protein VP3 138950
32 1K5M 3 C COAT PROTEIN VP3 (P1C) 147712
33 1QJU 3 3 PROTEIN VP3 RESIDUES 331-568 147711
34 3VBF 3 C Genome Polyprotein, capsid protein VP3 STRAIN FUYANG, ANHUI. P.R.C/17.08/1 138948
35 2PLV 3 3 HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3) 138950
36 4PDW 3 C Genome polyprotein resdiues 332-657 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
37 4CDQ 3 C VP3 138948
38 3ZFE 3 C VP3 VIRION OF HUMAN ENTEROVIRUS 71 138948
39 1QJX 3 3 PROTEIN VP3 RESIDUES 331-568 147711
40 1QJY 3 3 PROTEIN VP3 RESIDUES 331-568 147711
41 1NCR 3 C coat protein VP3 147711
42 3VBO 3 C Genome Polyprotein, capsid protein VP3 138948
43 1ZBE 3 3 Coat protein VP3 12110
44 1AYN 3 3 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
45 1C8M 3 3 HUMAN RHINOVIRUS 16 COAT PROTEIN RESIDUES 331-568 147711
46 2MEV 3 3 MENGO VIRUS COAT PROTEIN (SUBUNIT VP3) 1821749
47 1AR7 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
48 1ND3 3 C coat protein VP3 147711
49 4IV3 3 C Capsid protein VP3 UNP RESIDUES 505-725 12110
50 1BEV 3 3 BOVINE ENTEROVIRUS COAT PROTEINS VP1 TO VP4 12064
51 4JGY 3 C Polyprotein, capsid protein VP3 STRAIN NINGBO.CHN/028-2/2009 138948
52 1AL2 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
53 1PO1 4 3 POLIOVIRUS TYPE 1 MAHONEY 138950
54 2WZR 3 3 POLYPROTEIN RESIDUES 504-724 12110
55 1AR9 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
56 4RQP 2 B, F, J, N, R Capsid protein VP3 138948
57 5C4W 3 C VP3 138948
58 1H8T 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
59 1PO2 4 3 POLIOVIRUS TYPE 1 MAHONEY 138950
60 1ASJ 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
61 1Z7S 3 3 Human coxsackievirus A21 Viral Protein 3 138950
62 1OOP 3 C Coat protein VP3 138949
63 4CDX 3 C VP3 138948
64 4RR3 2 B, F, J, N, R Capsid protein VP3 138948
65 1FMD 3 3 FOOT-AND-MOUTH DISEASE VIRUS (SUBUNIT VP3) 12110
66 3VDD 3 C Protein VP3 UNP residues 331-567 147711
67 1NA1 3 C Coat protein VP3 147712
68 5C9A 3 C VP3 138948
69 4CDU 3 C VP3 138948
70 1VBB 4 3 POLIOVIRUS TYPE 3 138950
71 1POV 3 3 POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) 138950
72 1AR6 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
73 1AR8 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
74 4N53 3 C Capsid protein VP3 138948
75 4CDW 3 C VP3 138948
76 4CEY 3 C VP3 138948
77 1VBC 4 3 POLIOVIRUS TYPE 3 138950
78 3TN9 3 3 Protein VP3 147711
79 3ZFG 3 C VP3 VIRION OF HUMAN ENTEROVIRUS 71 138948
80 1VBE 4 3 POLIOVIRUS TYPE 3 138950
81 4CEW 3 C VP3 138948
82 3VBS 3 C Genome Polyprotein, capsid protein VP3 138948
83 5ABJ 3 C VP3 UNP RESIDUES 324-565 138948
84 2WS9 3 3 P1 CAPSID PROTEIN VP3, RESIDUES 311-536 47000
85 1VBD 4 3 POLIOVIRUS TYPE 1 MAHONEY P1/MAHONEY 138950
86 1TME 3 3 THEILER'S MURINE ENCEPHALOMYELITIS VIRUS (SUBUNIT VP3) 1821750
87 3ZFF 3 C VP3 138948
88 1RHI 3 3 HUMAN RHINOVIRUS 3 COAT PROTEIN 147712
89 1VBA 4 3 POLIOVIRUS TYPE 3 138950
90 4JGZ 3 C Polyprotein, capsid protein VP3 STRAIN NINGBO.CHN/028-2/2009 138948
91 1MQT 3 C Polyprotein Capsid Protein SVDV COAT PROTEIN VP3 138949
92 1RVF 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN 147712
93 4GB3 3 3 coat protein 3 UNP residues 333-570 138949
94 2X5I 3 C VP3 138949
95 1PIV 4 3 POLIOVIRUS TYPE 3 (SUBUNIT VP3) 138950
96 1COV 3 3 COXSACKIEVIRUS COAT PROTEIN 138949
97 1R1A 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
98 1EV1 3 3 ECHOVIRUS 1 VP1, VP2, VP3, VP4 138949
99 4N43 3 C Capsid protein VP3 EV71 capsid protein VP3 138948
100 3VBR 3 C Genome Polyprotein, capsid protein VP3 138948
101 2XBO 3 3 P1 CAPSID PROTEIN VP3, RESIDUES 311-536 47000
102 4YVS 2 B, E, H, K, N Capsid protein VP3 138948
103 1V9U 3 3 Coat protein VP3 147711
104 4RS5 1 B, E, H, K, N Capsid protein VP3 138948
105 4GMP 3 3 capsid protein VP3 UNP residues 324-565 138948
106 4AED 3 C VP3 138948
107 3VBU 3 C Genome Polyprotein, capsid protein VP3 138948
108 4YVW 2 B, F, H, K, N Capsid protein VP3 138948
109 5DDJ 3 3 Foot and mouth disease virus, VP3 12110
110 3DPR 3 C Protein VP3 147711
111 4L3B 3 C Protein VP3 UNP residues 331-567 147711
112 2WFF 3 3 P1 CAPSID PROTEIN VP3, RESIDUES 311-536 47000
113 6RJF 3 3 VP3 138949
114 6O06 3 C VP3 UNP residues 331-569 138949
115 6MZI 2 B viral protein 3 UNP residues 318-564 138951
116 6I2K 3 C Polyprotein 138948
117 6ILL 3 C Capsid protein VP3 138949
118 6ILM 3 C Capsid protein VP3 138949
119 6ILN 3 C Capsid protein VP3 138949
120 6ILO 3 C Capsid protein VP3 138949
121 6ILP 3 C Capsid protein VP3 138949
122 6ILJ 3 C Capsid protein VP3 138949
123 6ILK 3 C Capsid protein VP3 138949
124 6IIO 3 C VP3 138948
125 6IIJ 3 C VP3 138948
126 6AKS 3 C VP3 138948
127 6AKT 3 C VP3 138948
128 6AKU 3 C VP3 138948
129 6HHT 3 C1, C2, F1, F2, I1, I2, L1, L2, O1, O2, R1, R2, U1, U2, X1, X2, a2, d2, g2, j2, m2, p2, s2, v2, y2 Echovirus 18 capsid protein 3 138949
130 6AJ7 5 C Capsid protein VP3 138951
131 6AJ9 7 C Capsid protein VP3 138951
132 6AJ2 3 C Capsid protein VP3 138951
133 6AJ3 3 C Capsid protein VP3 138951
134 6AJ0 3 C Capsid protein VP3 138951
135 6HBG 3 C Echovirus 18 viral protein 3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
136 6HBH 3 C Echovirus 18 capsid protein 3 138949
137 6HBJ 3 C Viral protein 3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
138 6HBK 2 C, F, I, L, O, R, U, X, a, d, g Echovirus 18 capsid protein 2 138949
139 6HBL 3 C, F, I, L, O, R, U, X, a, d, g, j, m, p, s Echovirus 18 capsid protein 3 138949
140 6ADR 2 C VP3 390157
141 6ADS 2 C VP3 390157
142 6ADT 2 C VP3 390157
143 6ADM 2 C VP3 390157
144 6ACY 3 C VP3 138948
145 6ACZ 3 C VP3 138948
146 6AD0 5 C VP3 138948
147 6AD1 3 C VP3 138948
148 6ACU 3 C VP3 138948
149 6ACW 3 C VP3 138948
150 6GZV 3 C Capsid protein VP3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
151 6DIZ 3 C VP3 138948
152 6DIJ 3 C VP3 138948
153 6CX1 4 B Capsid protein VP3 residues 435-672 390157
154 6CSA 2 B viral protein 3 UNP residues 318-564 138951
155 6CSG 2 B viral protein 3 UNP residues 318-564 138951
156 6CSH 2 B viral protein 3 UNP residues 318-564 138951
157 6CRP 2 B viral protein 3 UNP residues 318-564 138951
158 6CRR 2 B viral protein 3 UNP residues 318-564 138951
159 6CRS 2 B viral protein 3 UNP residues 318-564 138951
160 6CRU 2 B viral protein 3 UNP residues 318-564 138951
161 6CS3 2 B viral protein 3 UNP residues 318-564 138951
162 6CS4 2 B viral protein 3 UNP residues 318-564 138951
163 6CS5 2 B viral protein 3 UNP residues 318-564 138951
164 6CS6 2 B viral protein 3 UNP residues 318-564 138951
165 5YHQ 2 C Capsid protein VP3 UNP RESIDUES 326-565 138948
166 6EIT 3 3 VP3 138950
167 5OYI 3 3, C, F, I, L Genome polyprotein 12110 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.46 | Details 3.6.1.15 | Details
168 5OWX 3 3 Genome polyprotein 12110 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.46 | Details 3.6.1.15 | Details
169 5OSN 3 C Capsid protein 12064
170 5XS4 3 C Genome polyprotein UNP residues 326-565 138948
171 5XS5 3 C Genome polyprotein UNP residues 326-565 138948
172 5XS7 5 C Genome polyprotein UNP residues 326-565 138948
173 5W3L 2 B viral protein 3 UNP residues 332-567 147712
174 5W3M 4 B viral protein 3 UNP residues 332-567 147712
175 5W3O 4 B viral protein 3 UNP residues 332-567 147712
176 5W3E 4 B viral protein 3 UNP residues 332-567 147712
177 5O5P 3 3 Capsid proteins, VP3 138950
178 5O5B 3 3 Capsid proteins 138950
179 5NER 3 3 O PanAsia VP3 12110
180 5NET 3 3 O1 Manisa VP3 12110
181 5NEU 3 3 Capsid protein 12110
182 5NED 3 C O PanAsia VP3 12110
183 5NEJ 3 3 O1 Manisa VP3 12110
184 5NEM 3 3 O PanAsia VP3 12110
185 5TSL 1 C coxsackievirus A16 138948
186 5KWL 3 3 VP3 UNP residues 342-571 138950
187 5KTZ 3 3 Genome polyprotein UNP residues 342-572 138950
188 5KU0 3 3 VP3 UNP residues 342-571 138950
189 5KU2 3 3 VP3 UNP residues 342-571 138950
190 5K0U 2 B Capsid protein VP3 UNP residues 333-567 463676
191 5JZG 2 B Capsid protein VP3 UNP residues 333-567 463676
192 3JD7 3 3 Capsid protein VP3 UNP residues 333-570 138949
193 3JBC 3 3 Capsid protein VP3 UNP residues 342-578 138950
194 3JBD 3 3 Capsid protein VP3 UNP residues 342-578 138950
195 3JBE 3 3 Capsid protein VP3 UNP residues 342-578 138950
196 3JBF 3 3 Capsid protein VP3 UNP residues 342-578 138950
197 3JBG 3 3 Capsid protein VP3 UNP residues 342-578 138950
198 5AC9 3 3 VP2 FMDV O1 MANISA SEROTYPE WITH A MUTATION AT VP2 S93Y 12110
199 5ACA 3 3 VP3 12110
200 3J9F 3 3 Protein VP3 UNP residues 342-579 138950
201 3J91 3 3 VP3 UNP residues 324-565 138948
202 3J8F 3 3 Capsid protein VP3 UNP residues 342-579 138950
203 4CTF 3 D0, D1, D2, D3, D4, D5, D6, D7, D8, D9, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, DL, DM, DN, DO, DP, DQ, DR, DS, DT, DU, DV, DW, DX, DY, DZ, Da, Db, Dc, Dd, De, Df, Dg, Dh, Di, Dj, Dk, Dl, Dm, Dn, Do, Dp, Dq, Dr, Ds, EA, EB, EC, ED, EE P1 RESIDUES 311-536 47000
204 4CTG 3 C0, C1, C2, C3, C4, C5, C6, C7, C8, C9, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, CL, CM, CN, CO, CP, CQ, CR, CS, CT, CU, CV, CW, CX, CY, CZ, Cc, Cd, Ce, Cf, Cg, Ch, Ci, Cj, Ck, Cl, Cm, Cn, Co, Cp, Cq, Cr, Cs, Ct, Cu, Cv, Cw, Cx, DA, DB P1 RESIDUES 311-536 47000
205 4C0U 3 C VP3 138948
206 4C0Y 3 C VP3 138948
207 4C10 5 C VP2 138948
208 3J48 3 3 Protein VP3 UNP residues 342-579 138950
209 3J3O 6 3 Protein VP3 UNP residues 342-579 138950
210 3J3P 5 3 Protein VP3 UNP residues 342-579 138950
211 3J2J 2 B Protein VP3 UNP residues 331-568 138949
212 3J22 3 C capsid protein VP3 UNP residues 324-562 138948
213 3J23 3 C capsid protein VP3 UNP residues 324-562 138948
214 3IYP 2 B Polyprotein 138949
215 3IYB 3 3 Precursor polyprotein 138950
216 3IYC 3 3 Precursor polyprotein 138950
217 3EPC 5 3 Protein VP3 138950
218 3EPD 6 3 protein VP3 138950
219 3EPF 5 3 Protein VP3 138950
220 2C8I 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
221 1Z7Z 3 3 human coxsackievirus A21 Viral Protein 3 residues 3043-3234 138950
222 1UPN 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
223 1NN8 4 3 coat protein VP3 138950
224 1M11 4 3 COAT PROTEIN VP3 138949
225 1JEW 4 3 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP3 Residues 333-570 138949
226 1DGI 4 3 VP3 138950
227 1D3E 4 3 PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP3) 169066
228 1D3I 4 3 PROTEIN (RHINOVIRUS 14 COAT PROTEIN VP3) 169066
229 1QGC 3 3 PROTEIN (VIRUS CAPSID PROTEIN VP3) 12110
230 1VRH 3 3 RHINOVIRUS 14 147712
231 1RUC 3 3 RHINOVIRUS 14 147712
232 1RUD 3 3 RHINOVIRUS 14 147712
233 1RUE 3 3 RHINOVIRUS 14 147712
234 1RUF 3 3 RHINOVIRUS 14 147712
235 1RUG 3 3 RHINOVIRUS 14 147712
236 1RUH 3 3 RHINOVIRUS 14 147712
237 1RUI 3 3 RHINOVIRUS 14 147712
238 1RUJ 3 3 RHINOVIRUS 14 147712
239 1HRV 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
240 2HWB 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
241 2HWC 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
242 2HWD 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
243 2HWE 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
244 2HWF 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
245 1HRI 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
246 1TMF 3 3 THEILER'S MURINE ENCEPHALOMYELITIS VIRUS (SUBUNIT VP3) 1821750
247 1MEC 3 3 MENGO VIRUS COAT PROTEIN (SUBUNIT VP1) 1821749
248 1R09 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
249 1R08 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
250 1RMU 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
251 2R04 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
252 2R06 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
253 2R07 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
254 2RM2 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
255 2RMU 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
256 2RR1 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
257 2RS1 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
258 2RS3 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
259 2RS5 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712