Sequence Similarity Clusters for the Entities in PDB 6ILL

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 13737
95 % 1 6 13504
90 % 1 6 14562
70 % 8 16 4953
50 % 11 29 849
40 % 98 213 201
30 % 98 215 211
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 12935
95 % 1 7 12767
90 % 1 7 12592
70 % 11 31 804
50 % 91 213 197
40 % 91 213 214
30 % 96 226 215
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 16089
95 % 1 7 12768
90 % 1 7 12593
70 % 11 31 805
50 % 8 23 931
40 % 100 227 192
30 % 121 268 126
Entity #4 | Chains: D
Capsid protein VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 47719
95 % 3 8 9936
90 % 10 20 3955
70 % 42 96 631
50 % 76 148 423
40 % 76 148 443
30 % 76 148 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Q4W 3 3 Coxsackievirus capsid protein VP3 138950
2 4Q4X 3 3 Coxsackievirus capsid protein VP3 138950
3 4Q4Y 3 3 Coxsackievirus capsid protein VP3 138950
4 5C8C 3 C VP3 138948
5 1AYM 3 3 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
6 4WM8 3 C VP3 138951
7 5BNP 3 C Capsid protein VP3 UNP residues 318-564 138951
8 3VBH 3 C Genome Polyprotein, vapsid protein VP3 138948
9 1PVC 4 3 POLIOVIRUS TYPE 3, SABIN STRAIN P3/SABIN P3/LEON/12A(1)B 138950
10 5BNO 3 C Capsid protein VP3 UNP residues 318-564 138951
11 1FPN 3 3 COAT PROTEIN VP3 147711
12 5OSN 3 C Capsid protein 12064
13 1ND2 3 C coat protein VP3 147711
14 4WM7 3 C VP3 138951
15 1HXS 3 3 GENOME POLYPROTEIN, COAT PROTEIN VP3 RESIDUES 341-577 138950
16 5BNN 3 C Capsid protein VP3 UNP residues 318-564 138951
17 1NCQ 3 C COAT PROTEIN VP3 147712
18 1D4M 3 3 PROTEIN (COXSACKIEVIRUS A9) VP3 138949
19 4RHV 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
20 1EAH 3 3 POLIOVIRUS TYPE 2 COAT PROTEINS VP1 TO VP4 138950
21 4Q4V 3 3 Coxsackievirus capsid protein VP3 138950
22 1K5M 3 C COAT PROTEIN VP3 (P1C) 147712
23 1QJU 3 3 PROTEIN VP3 RESIDUES 331-568 147711
24 3VBF 3 C Genome Polyprotein, capsid protein VP3 STRAIN FUYANG, ANHUI. P.R.C/17.08/1 138948
25 2PLV 3 3 HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP3) 138950
26 4PDW 3 C Genome polyprotein resdiues 332-657 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
27 4CDQ 3 C VP3 138948
28 3ZFE 3 C VP3 VIRION OF HUMAN ENTEROVIRUS 71 138948
29 1QJX 3 3 PROTEIN VP3 RESIDUES 331-568 147711
30 1QJY 3 3 PROTEIN VP3 RESIDUES 331-568 147711
31 1NCR 3 C coat protein VP3 147711
32 3VBO 3 C Genome Polyprotein, capsid protein VP3 138948
33 1AYN 3 3 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
34 1C8M 3 3 HUMAN RHINOVIRUS 16 COAT PROTEIN RESIDUES 331-568 147711
35 1AR7 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
36 1ND3 3 C coat protein VP3 147711
37 1BEV 3 3 BOVINE ENTEROVIRUS COAT PROTEINS VP1 TO VP4 12064
38 4JGY 3 C Polyprotein, capsid protein VP3 STRAIN NINGBO.CHN/028-2/2009 138948
39 1AL2 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
40 1PO1 4 3 POLIOVIRUS TYPE 1 MAHONEY 138950
41 1AR9 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
42 4RQP 2 B, F, J, N, R Capsid protein VP3 138948
43 5C4W 3 C VP3 138948
44 1H8T 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
45 1PO2 4 3 POLIOVIRUS TYPE 1 MAHONEY 138950
46 1ASJ 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
47 1Z7S 3 3 Human coxsackievirus A21 Viral Protein 3 138950
48 1OOP 3 C Coat protein VP3 138949
49 4CDX 3 C VP3 138948
50 4RR3 2 B, F, J, N, R Capsid protein VP3 138948
51 3VDD 3 C Protein VP3 UNP residues 331-567 147711
52 1NA1 3 C Coat protein VP3 147712
53 5C9A 3 C VP3 138948
54 4CDU 3 C VP3 138948
55 1VBB 4 3 POLIOVIRUS TYPE 3 138950
56 1POV 3 3 POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1) 138950
57 1AR6 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
58 1AR8 4 3 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
59 4N53 3 C Capsid protein VP3 138948
60 4CDW 3 C VP3 138948
61 4CEY 3 C VP3 138948
62 1VBC 4 3 POLIOVIRUS TYPE 3 138950
63 3TN9 3 3 Protein VP3 147711
64 3ZFG 3 C VP3 VIRION OF HUMAN ENTEROVIRUS 71 138948
65 1VBE 4 3 POLIOVIRUS TYPE 3 138950
66 4CEW 3 C VP3 138948
67 3VBS 3 C Genome Polyprotein, capsid protein VP3 138948
68 5ABJ 3 C VP3 UNP RESIDUES 324-565 138948
69 1VBD 4 3 POLIOVIRUS TYPE 1 MAHONEY P1/MAHONEY 138950
70 3ZFF 3 C VP3 138948
71 1RHI 3 3 HUMAN RHINOVIRUS 3 COAT PROTEIN 147712
72 1VBA 4 3 POLIOVIRUS TYPE 3 138950
73 4JGZ 3 C Polyprotein, capsid protein VP3 STRAIN NINGBO.CHN/028-2/2009 138948
74 1MQT 3 C Polyprotein Capsid Protein SVDV COAT PROTEIN VP3 138949
75 1RVF 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN 147712
76 4GB3 3 3 coat protein 3 UNP residues 333-570 138949
77 2X5I 3 C VP3 138949
78 1PIV 4 3 POLIOVIRUS TYPE 3 (SUBUNIT VP3) 138950
79 1COV 3 3 COXSACKIEVIRUS COAT PROTEIN 138949
80 1R1A 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
81 1EV1 3 3 ECHOVIRUS 1 VP1, VP2, VP3, VP4 138949
82 4N43 3 C Capsid protein VP3 EV71 capsid protein VP3 138948
83 3VBR 3 C Genome Polyprotein, capsid protein VP3 138948
84 4YVS 2 B, E, H, K, N Capsid protein VP3 138948
85 1V9U 3 3 Coat protein VP3 147711
86 4RS5 1 B, E, H, K, N Capsid protein VP3 138948
87 4GMP 3 3 capsid protein VP3 UNP residues 324-565 138948
88 4AED 3 C VP3 138948
89 3VBU 3 C Genome Polyprotein, capsid protein VP3 138948
90 4YVW 2 B, F, H, K, N Capsid protein VP3 138948
91 3DPR 3 C Protein VP3 147711
92 4L3B 3 C Protein VP3 UNP residues 331-567 147711
93 6SK5 4 C Rhinovirus B5 VP3 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
94 6SK6 4 C Rhinovirus B5 VP3 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
95 6SK7 3 C VP3 capsid protein 147711 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
96 6RJF 3 3 VP3 138949
97 6O06 3 C VP3 UNP residues 331-569 138949
98 6MZI 2 B viral protein 3 UNP residues 318-564 138951
99 6I2K 3 C Polyprotein 138948
100 6ILL 3 C Capsid protein VP3 138949
101 6ILM 3 C Capsid protein VP3 138949
102 6ILN 3 C Capsid protein VP3 138949
103 6ILO 3 C Capsid protein VP3 138949
104 6ILP 3 C Capsid protein VP3 138949
105 6ILJ 3 C Capsid protein VP3 138949
106 6ILK 3 C Capsid protein VP3 138949
107 6IIO 3 C VP3 138948
108 6IIJ 3 C VP3 138948
109 6AKS 3 C VP3 138948
110 6AKT 3 C VP3 138948
111 6AKU 3 C VP3 138948
112 6HHT 3 C1, C2, F1, F2, I1, I2, L1, L2, O1, O2, R1, R2, U1, U2, X1, X2, a2, d2, g2, j2, m2, p2, s2, v2, y2 Echovirus 18 capsid protein 3 138949
113 6AJ7 5 C Capsid protein VP3 138951
114 6AJ9 7 C Capsid protein VP3 138951
115 6AJ2 3 C Capsid protein VP3 138951
116 6AJ3 3 C Capsid protein VP3 138951
117 6AJ0 3 C Capsid protein VP3 138951
118 6HBG 3 C Echovirus 18 viral protein 3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
119 6HBH 3 C Echovirus 18 capsid protein 3 138949
120 6HBJ 3 C Viral protein 3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
121 6HBK 2 C, F, I, L, O, R, U, X, a, d, g Echovirus 18 capsid protein 2 138949
122 6HBL 3 C, F, I, L, O, R, U, X, a, d, g, j, m, p, s Echovirus 18 capsid protein 3 138949
123 6ACY 3 C VP3 138948
124 6ACZ 3 C VP3 138948
125 6AD0 5 C VP3 138948
126 6AD1 3 C VP3 138948
127 6ACU 3 C VP3 138948
128 6ACW 3 C VP3 138948
129 6GZV 3 C Capsid protein VP3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
130 6DIZ 3 C VP3 138948
131 6DIJ 3 C VP3 138948
132 6CV1 2 B viral protein 3 UNP residues 1-247 138951
133 6CV2 2 B viral protein 3 UNP residues 1-247 138951
134 6CV3 2 B viral protein 3 UNP residues 1-247 138951
135 6CV4 2 B viral protein 3 UNP residues 1-247 138951
136 6CV5 2 B viral protein 3 UNP residues 1-247 138951
137 6CVB 2 B viral protein 3 UNP residues 1-247 138951
138 6CSA 2 B viral protein 3 UNP residues 318-564 138951
139 6CSG 2 B viral protein 3 UNP residues 318-564 138951
140 6CSH 2 B viral protein 3 UNP residues 318-564 138951
141 6CRP 2 B viral protein 3 UNP residues 318-564 138951
142 6CRR 2 B viral protein 3 UNP residues 318-564 138951
143 6CRS 2 B viral protein 3 UNP residues 318-564 138951
144 6CRU 2 B viral protein 3 UNP residues 318-564 138951
145 6CS3 2 B viral protein 3 UNP residues 318-564 138951
146 6CS4 2 B viral protein 3 UNP residues 318-564 138951
147 6CS5 2 B viral protein 3 UNP residues 318-564 138951
148 6CS6 2 B viral protein 3 UNP residues 318-564 138951
149 5YHQ 2 C Capsid protein VP3 UNP RESIDUES 326-565 138948
150 6EIT 3 3 VP3 138950
151 5XS4 3 C Genome polyprotein UNP residues 326-565 138948
152 5XS5 3 C Genome polyprotein UNP residues 326-565 138948
153 5XS7 5 C Genome polyprotein UNP residues 326-565 138948
154 5W3L 2 B viral protein 3 UNP residues 332-567 147712
155 5W3M 4 B viral protein 3 UNP residues 332-567 147712
156 5W3O 4 B viral protein 3 UNP residues 332-567 147712
157 5W3E 4 B viral protein 3 UNP residues 332-567 147712
158 5O5P 3 3 Capsid proteins, VP3 138950
159 5O5B 3 3 Capsid proteins 138950
160 5TSL 1 C coxsackievirus A16 138948
161 5KWL 3 3 VP3 UNP residues 342-571 138950
162 5KTZ 3 3 Genome polyprotein UNP residues 342-572 138950
163 5KU0 3 3 VP3 UNP residues 342-571 138950
164 5KU2 3 3 VP3 UNP residues 342-571 138950
165 5K0U 2 B Capsid protein VP3 UNP residues 333-567 463676
166 5JZG 2 B Capsid protein VP3 UNP residues 333-567 463676
167 3JD7 3 3 Capsid protein VP3 UNP residues 333-570 138949
168 3JBC 3 3 Capsid protein VP3 UNP residues 342-578 138950
169 3JBD 3 3 Capsid protein VP3 UNP residues 342-578 138950
170 3JBE 3 3 Capsid protein VP3 UNP residues 342-578 138950
171 3JBF 3 3 Capsid protein VP3 UNP residues 342-578 138950
172 3JBG 3 3 Capsid protein VP3 UNP residues 342-578 138950
173 3J9F 3 3 Protein VP3 UNP residues 342-579 138950
174 3J91 3 3 VP3 UNP residues 324-565 138948
175 3J8F 3 3 Capsid protein VP3 UNP residues 342-579 138950
176 4C0U 3 C VP3 138948
177 4C0Y 3 C VP3 138948
178 4C10 5 C VP2 138948
179 3J48 3 3 Protein VP3 UNP residues 342-579 138950
180 3J3O 6 3 Protein VP3 UNP residues 342-579 138950
181 3J3P 5 3 Protein VP3 UNP residues 342-579 138950
182 3J2J 2 B Protein VP3 UNP residues 331-568 138949
183 3J22 3 C capsid protein VP3 UNP residues 324-562 138948
184 3J23 3 C capsid protein VP3 UNP residues 324-562 138948
185 3IYP 2 B Polyprotein 138949
186 3IYB 3 3 Precursor polyprotein 138950
187 3IYC 3 3 Precursor polyprotein 138950
188 3EPC 5 3 Protein VP3 138950
189 3EPD 6 3 protein VP3 138950
190 3EPF 5 3 Protein VP3 138950
191 2C8I 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
192 1Z7Z 3 3 human coxsackievirus A21 Viral Protein 3 residues 3043-3234 138950
193 1UPN 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
194 1NN8 4 3 coat protein VP3 138950
195 1M11 4 3 COAT PROTEIN VP3 138949
196 1JEW 4 3 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP3 Residues 333-570 138949
197 1DGI 4 3 VP3 138950
198 1D3E 4 3 PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP3) 169066
199 1D3I 4 3 PROTEIN (RHINOVIRUS 14 COAT PROTEIN VP3) 169066
200 1VRH 3 3 RHINOVIRUS 14 147712
201 1RUC 3 3 RHINOVIRUS 14 147712
202 1RUD 3 3 RHINOVIRUS 14 147712
203 1RUE 3 3 RHINOVIRUS 14 147712
204 1RUF 3 3 RHINOVIRUS 14 147712
205 1RUG 3 3 RHINOVIRUS 14 147712
206 1RUH 3 3 RHINOVIRUS 14 147712
207 1RUI 3 3 RHINOVIRUS 14 147712
208 1RUJ 3 3 RHINOVIRUS 14 147712
209 1HRV 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
210 2HWB 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
211 2HWC 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
212 2HWD 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
213 2HWE 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
214 2HWF 3 3 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP3) 147711
215 1HRI 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
216 1R09 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
217 1R08 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
218 1RMU 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
219 2R04 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
220 2R06 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
221 2R07 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
222 2RM2 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
223 2RMU 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
224 2RR1 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
225 2RS1 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
226 2RS3 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712
227 2RS5 3 3 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) 147712