Sequence Similarity Clusters for the Entities in PDB 6ILL

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 15256
95 % 1 6 15756
90 % 1 6 14172
70 % 8 16 4790
50 % 11 29 822
40 % 87 167 229
30 % 94 204 213
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 12551
95 % 1 7 12399
90 % 1 7 12249
70 % 11 31 761
50 % 87 204 200
40 % 87 204 212
30 % 92 217 215
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 15404
95 % 1 7 12458
90 % 1 7 12311
70 % 11 31 765
50 % 96 216 179
40 % 96 218 191
30 % 117 259 126
Entity #4 | Chains: D
Capsid protein VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46470
95 % 3 8 9625
90 % 10 20 3814
70 % 40 94 616
50 % 72 141 431
40 % 72 141 452
30 % 72 141 473

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Q4W 4 4 Coxsackievirus capsid protein VP4 138950
2 4Q4X 4 4 Coxsackievirus capsid protein VP4 138950
3 4Q4Y 4 4 Coxsackievirus capsid protein VP4 138950
4 1PVC 5 4 POLIOVIRUS TYPE 3, SABIN STRAIN P3/SABIN P3/LEON/12A(1)B 138950
5 1HXS 4 4 GENOME POLYPROTEIN, COAT PROTEIN VP4 RESIDUES 1-68 138950
6 1NCQ 4 D COAT PROTEIN VP4 147712
7 1D4M 4 4 PROTEIN (COXSACKIEVIRUS A9) VP4 138949
8 4RHV 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
9 1EAH 4 4 POLIOVIRUS TYPE 2 COAT PROTEINS VP1 TO VP4 138950
10 4Q4V 4 4 Coxsackievirus capsid protein VP4 138950
11 1K5M 4 D COAT PROTEIN VP4 (P1A) 147712
12 2PLV 4 4 HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP4) 138950
13 4PDW 4 D Capsid protein VP4/VP2 residue 2-69 147712
14 1AR7 5 4 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
15 1AL2 5 4 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
16 1PO1 5 4 POLIOVIRUS TYPE 1 MAHONEY 138950
17 1AR9 5 4 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
18 1H8T 4 D ECHOVIRUS 11 COAT PROTEIN VP4 138949
19 1PO2 5 4 POLIOVIRUS TYPE 1 MAHONEY 138950
20 1ASJ 5 4 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
21 1Z7S 4 4 Human coxsackievirus A21 Viral Protein 4 138950
22 1OOP 4 D Coat protein VP4 138949
23 1NA1 4 D Coat protein VP4 147712
24 1VBB 5 4 POLIOVIRUS TYPE 3 138950
25 1AR6 5 4 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
26 1AR8 5 4 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
27 1VBC 5 4 POLIOVIRUS TYPE 3 138950
28 1VBE 5 4 POLIOVIRUS TYPE 3 138950
29 1VBD 5 4 POLIOVIRUS TYPE 1 MAHONEY P1/MAHONEY 138950
30 1RHI 4 4 HUMAN RHINOVIRUS 3 COAT PROTEIN 147712
31 1VBA 5 4 POLIOVIRUS TYPE 3 138950
32 1MQT 4 D Polyprotein Capsid Protein SVDV COAT PROTEIN VP4 138949
33 1RVF 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN 169066
34 4GB3 4 4 coat protein 4 UNP residues 2-69 138949
35 2X5I 4 D VP4 138949
36 1PIV 5 4 POLIOVIRUS TYPE 3 (SUBUNIT VP4) 138950
37 1COV 4 4 COXSACKIEVIRUS COAT PROTEIN 138949
38 1EV1 4 4 ECHOVIRUS 1 VP1, VP2, VP3, VP4 138949
39 6RJF 4 4 VP4 138949
40 6ILL 4 D Capsid protein VP4 138949
41 6ILM 4 D Capsid protein VP4 138949
42 6ILP 4 D Capsid protein VP4 138949
43 6ILJ 4 D Capsid protein VP4 138949
44 6ILK 4 D Capsid protein VP4 138949
45 6HBG 4 D Echovirus 18 viral protein 4 138949
46 6GZV 4 D Capsid protein VP4 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
47 5W3L 4 D viral protein 4 UNP residues 2-69 147712
48 5W3M 6 D viral protein 4 UNP residues 2-69 147712
49 5W3E 6 D viral protein 4 UNP residues 2-69 147712
50 5O5P 4 4 Genome polyprotein 138950 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
51 5O5B 4 4 VP4 138950 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
52 3JD7 4 4 Capsid protein VP4 UNP residues 2-69 138949
53 3JBC 4 4 Capsid protein VP4 UNP residues 2-69 138950
54 3JBD 4 4 Capsid protein VP4 UNP residues 2-69 138950
55 3JBE 4 4 Capsid protein VP4 UNP residues 2-69 138950
56 3JBF 4 4 Capsid protein VP4 UNP residues 2-69 138950
57 3JBG 4 4 Capsid protein VP4 UNP residues 2-69 138950
58 3J9F 4 4 Protein VP4 UNP residues 2-69 138950
59 3J8F 4 4 Capsid protein VP4 UNP residues 2-69 138950
60 3J3O 7 4 Protein VP4 UNP residues 2-69 138950
61 3IYP 4 D Polyprotein 138949
62 3EPC 4 4 Protein VP4 138950
63 3EPD 5 4 protein VP4 138950
64 3EPF 4 4 Protein VP4 138950
65 1UPN 4 D ECHOVIRUS 11 COAT PROTEIN VP4 STRUCTURE OF ECHOVIRUS TYPE 11 FITTED INTO CRYO-EM ELECTRON DENSITY FOR ECHOVIRUS TYPE 12. THE EM DENSITY HAS BEEN DEPOSITED IN THE EMDB, WITH ACCESSION CODE 1057 138949
66 1NN8 5 4 coat protein VP4 138950
67 1JEW 5 4 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP4 Residues 2-69 138949
68 1DGI 5 4 VP4 POLIOVIRUS FRAGMENTS VP1,VP2,VP3,VP4 138950
69 1D3I 5 4 PROTEIN (RHINOVIRUS 14 COAT PROTEIN VP4) 169066
70 1VRH 4 4 RHINOVIRUS 14 147712
71 1RUC 4 4 RHINOVIRUS 14 147712
72 1RUD 4 4 RHINOVIRUS 14 147712
73 1RUE 4 4 RHINOVIRUS 14 147712
74 1RUF 4 4 RHINOVIRUS 14 147712
75 1RUG 4 4 RHINOVIRUS 14 147712
76 1RUH 4 4 RHINOVIRUS 14 147712
77 1RUI 4 4 RHINOVIRUS 14 147712
78 1RUJ 4 4 RHINOVIRUS 14 147712
79 1HRV 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
80 2HWB 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
81 2HWC 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
82 1HRI 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
83 1R09 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
84 1R08 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
85 1RMU 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
86 2R04 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
87 2R06 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
88 2R07 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
89 2RM2 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
90 2RMU 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
91 2RR1 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
92 2RS1 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 169066
93 2RS3 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712
94 2RS5 4 4 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) 147712