Sequence Similarity Clusters for the Entities in PDB 6ILO

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74645
95 % 1 1 53141
90 % 1 1 50205
70 % 1 1 43990
50 % 1 2 26424
40 % 1 9 7995
30 % 3 15 4708
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 12390
95 % 4 7 12264
90 % 4 7 12117
70 % 14 31 741
50 % 90 204 199
40 % 90 204 213
30 % 95 217 214
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 81277
95 % 4 7 12243
90 % 4 7 12093
70 % 14 31 742
50 % 99 216 177
40 % 99 218 189
30 % 120 259 126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures