Sequence Similarity Clusters for the Entities in PDB 6ILO

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 83113
95 % 1 1 55334
90 % 1 1 52228
70 % 1 1 45622
50 % 1 2 27076
40 % 1 9 8493
30 % 3 15 4861
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 13304
95 % 4 7 13046
90 % 4 7 12888
70 % 14 31 807
50 % 94 213 202
40 % 94 213 215
30 % 99 226 217
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 86466
95 % 4 7 12858
90 % 4 7 12762
70 % 14 31 815
50 % 103 225 180
40 % 103 227 192
30 % 124 268 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures