Sequence Similarity Clusters for the Entities in PDB 6ILO

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 82959
95 % 1 1 55191
90 % 1 1 52111
70 % 1 1 45501
50 % 1 2 26991
40 % 1 9 8475
30 % 3 15 4962
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 13256
95 % 4 7 12444
90 % 4 7 12277
70 % 14 31 808
50 % 94 213 200
40 % 94 213 212
30 % 99 226 216
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 82958
95 % 4 7 12864
90 % 4 7 12697
70 % 14 31 814
50 % 11 23 944
40 % 103 227 190
30 % 124 268 127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4Q4W 2 2 Coxsackievirus capsid protein VP2 138950
2 4Q4X 2 2 Coxsackievirus capsid protein VP2 138950
3 4Q4Y 2 2 Coxsackievirus capsid protein VP2 138950
4 1AYM 2 2 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
5 4WM8 2 B VP2 138951
6 5BNP 2 B Capsid protein VP2 UNP residues 70-317 138951
7 3VBH 2 B Genome polyprotein, capsid protein VP2 138948
8 1PVC 3 2 POLIOVIRUS TYPE 3, SABIN STRAIN P3/SABIN P3/LEON/12A(1)B 138950
9 5BNO 2 B Capsid protein VP2 UNP residues 70-317 138951
10 1FPN 2 2 COAT PROTEIN VP2 147711
11 5OSN 2 B Capsid protein 12064
12 1ND2 2 B coat protein VP2 147711
13 4WM7 2 B VP2 138951
14 1HXS 2 2 GENOME POLYPROTEIN, COAT PROTEIN VP2 RESIDUES 69-340 138950
15 5BNN 2 B Capsid protein VP2 UNP residues 70-317 138951
16 1NCQ 2 B COAT PROTEIN VP2 147712
17 1D4M 2 2 PROTEIN (COXSACKIEVIRUS A9) VP2 138949
18 4RHV 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
19 1EAH 2 2 POLIOVIRUS TYPE 2 COAT PROTEINS VP1 TO VP4 138950
20 4Q4V 2 2 Coxsackievirus capsid protein VP2 138950
21 1K5M 2 B CHIMERA OF HRV14 COAT PROTEIN VP2 (P1B) AND the V3 loop of HIV-1 gp120 THE CHIMERA CONSISTS OF THE HRV14 COAT PROTEIN VP2 (P1B) AND RESIDUES 314-325 OF HIV-1 gp120. 147712
22 1QJU 2 2 PROTEIN VP2 RESIDUES 70-330 147711
23 3VBF 2 B Genome Polyprotein, capsid protein VP2 STRAIN FUYANG, ANHUI. P.R.C/17.08/1 138948
24 2PLV 2 2 HUMAN POLIOVIRUS TYPE 1 (SUBUNIT VP2) 138950
25 4PDW 2 B Genome polyprotein resdiues 70-331 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
26 4CDQ 2 B VP2 138948
27 3ZFE 2 B VP2 VIRION OF HUMAN ENTEROVIRUS 71 138948
28 1QJX 2 2 PROTEIN VP2 RESIDUES 70-330 147711
29 1QJY 2 2 PROTEIN VP2 RESIDUES 70-330 147711
30 1NCR 2 B coat protein VP2 147711
31 3VBO 2 B Genome Polyprotein, capsid protein VP2 138948
32 1AYN 2 2 HUMAN RHINOVIRUS 16 COAT PROTEIN 169066
33 1C8M 2 2 HUMAN RHINOVIRUS 16 COAT PROTEIN RESIDUES 79-330 147711
34 1AR7 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
35 1ND3 2 B coat protein VP2 147711
36 1BEV 2 2 BOVINE ENTEROVIRUS COAT PROTEINS VP1 TO VP4 12064
37 4JGY 2 B Polyprotein, capsid protein VP2 STRAIN NINGBO.CHN/028-2/2009 138948
38 1AL2 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
39 1PO1 3 2 POLIOVIRUS TYPE 1 MAHONEY 138950
40 1AR9 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
41 5C4W 2 B VP2 138948
42 1H8T 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
43 1PO2 3 2 POLIOVIRUS TYPE 1 MAHONEY 138950
44 1ASJ 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
45 1Z7S 2 2 Human COXSACKIEVIRUS A21 Viral Protein 2 138950
46 1OOP 2 B Coat protein VP2 138949
47 4CDX 2 B VP2 138948
48 3VDD 2 B Protein VP2 UNP residues 70-330 147711
49 1NA1 2 B Coat protein VP2 147712
50 4CDU 2 B VP2 138948
51 1VBB 3 2 POLIOVIRUS TYPE 3 138950
52 1AR6 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
53 1AR8 3 2 P1/MAHONEY POLIOVIRUS VIRUS PROTOMER 138950
54 4N53 2 B Capsid protein VP2 138948
55 4CDW 2 B VP2 138948
56 4CEY 2 B VP2 138948
57 1VBC 3 2 POLIOVIRUS TYPE 3 138950
58 3TN9 2 2 Protein VP2 147711
59 3ZFG 2 B VP2 VIRION OF HUMAN ENTEROVIRUS 71 138948
60 1VBE 3 2 POLIOVIRUS TYPE 3 138950
61 4CEW 2 B VP2 138948
62 3VBS 2 B Genome Polyprotein, capsid protein VP2 138948
63 5ABJ 2 B VP2 UNP RESIDUES 70-323 138948
64 1VBD 3 2 POLIOVIRUS TYPE 1 MAHONEY P1/MAHONEY 138950
65 3ZFF 2 B VP2 138948
66 1RHI 2 2 HUMAN RHINOVIRUS 3 COAT PROTEIN 147712
67 1VBA 3 2 POLIOVIRUS TYPE 3 138950
68 4JGZ 2 B Polyprotein, capsid protein VP2 STRAIN NINGBO.CHN/028-2/2009 138948
69 1MQT 2 B Polyprotein Capsid Protein SVDV COAT PROTEIN VP2 138949
70 1RVF 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN 147712
71 4GB3 2 2 coat protein 2 UNP residues 70-332 138949
72 2X5I 2 B VP2 138949
73 1PIV 3 2 POLIOVIRUS TYPE 3 (SUBUNIT VP2) 138950
74 1COV 2 2 COXSACKIEVIRUS COAT PROTEIN 138949
75 1R1A 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
76 1EV1 2 2 ECHOVIRUS 1 VP1, VP2, VP3, VP4 138949
77 4N43 2 B Capsid protein VP2 EV71 capsid protein VP2 138948
78 3VBR 2 B Genome Polyprotein, capsid protein VP0 138948
79 1V9U 2 2 Coat protein VP2 147711
80 4AED 2 B VP2 138948
81 3VBU 2 B Genome Polyprotein, capsid protein VP0 138948
82 3DPR 2 B Protein VP2 147711
83 4L3B 2 B Protein VP2 UNP residues 70-330 147711
84 6SK5 2 B Rhinovirus B5 VP2 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
85 6SK6 2 B Rhinovirus B5 VP2 147712 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
86 6SK7 2 B VP2 capsid protein 147711 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
87 6RJF 2 2 VP2 138949
88 6O06 2 B VP2 UNP residues 77-330 138949
89 6MZI 3 C viral protein 2 UNP residues 70-317 138951
90 6I2K 2 B Polyprotein 138948
91 6ILL 2 B Capsid protein VP2 138949
92 6ILM 2 B Capsid protein VP2 138949
93 6ILN 2 B Capsid protein VP2 138949
94 6ILO 2 B Capsid protein VP2 138949
95 6ILP 2 B Capsid protein VP2 138949
96 6ILJ 2 B Capsid protein VP2 138949
97 6ILK 2 B Capsid protein VP2 138949
98 6IIJ 2 B VP2 138948
99 6AKS 2 B VP2 138948
100 6AKT 2 B VP2 138948
101 6AKU 2 B VP2 138948
102 6HHT 2 B1, B2, E1, E2, H1, H2, K1, K2, N1, N2, Q1, Q2, T1, T2, W1, W2, Z2, c2, f2, i2, l2, o2, r2, u2, x2 Echovirus 18 capsid protein 2 138949
103 6AJ7 4 B Capsid protein VP2 138951
104 6AJ9 6 B Capsid protein VP2 138951
105 6AJ2 2 B Capsid protein VP2 138951
106 6AJ3 2 B Capsid protein VP2 138951
107 6AJ0 2 B Virion protein 2 138951
108 6HBG 2 B Echovirus 18 viral protein 2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
109 6HBH 2 B Echovirus 18 capsid protein 2 138949
110 6HBJ 2 B Viral protein 2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
111 6HBK 3 B, E, H, K, N, Q, T, W, Z, c, f Echovirus 18 capsid protein 3 138949
112 6HBL 2 B, E, H, K, N, Q, T, W, Z, c, f, i, l, o, r Echovirus 18 capsid protein 2 138949
113 6ACY 2 B VP2 138948
114 6ACZ 2 B VP2 138948
115 6AD0 4 B VP2 138948
116 6ACU 2 B VP2 138948
117 6GZV 2 B Capsid protein VP2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
118 6DIZ 2 B VP2 138948
119 6DIJ 2 B VP2 138948
120 6CV1 3 C viral protein 2 UNP residues 1-248 138951
121 6CV2 3 C viral protein 2 UNP residues 1-248 138951
122 6CV3 3 C viral protein 2 UNP residues 1-248 138951
123 6CV4 3 C viral protein 2 UNP residues 1-248 138951
124 6CV5 3 C viral protein 2 UNP residues 1-248 138951
125 6CVB 3 C viral protein 2 UNP residues 1-248 138951
126 6CSA 3 C viral protein 2 UNP residues 70-317 138951
127 6CSG 3 C viral protein 2 UNP residues 70-317 138951
128 6CSH 3 C viral protein 2 UNP residues 70-317 138951
129 6CRP 3 C viral protein 2 UNP residues 70-317 138951
130 6CRR 3 C viral protein 2 UNP residues 70-317 138951
131 6CRS 3 C viral protein 2 UNP residues 70-317 138951
132 6CRU 3 C viral protein 2 UNP residues 70-317 138951
133 6CS3 3 C viral protein 2 UNP residues 70-317 138951
134 6CS4 3 C viral protein 2 UNP residues 70-317 138951
135 6CS5 3 C viral protein 2 UNP residues 70-317 138951
136 6CS6 3 C viral protein 2 UNP residues 70-317 138951
137 6EIT 2 2 VP2 138950
138 5XS4 2 B Genome polyprotein UNP residues 7-=325 138948
139 5XS7 4 B Genome polyprotein UNP residues 70-325 138948
140 5W3L 3 C viral protein 2 UNP residues 70-331 147712
141 5W3M 5 C viral protein 2 UNP residues 70-331 147712
142 5W3O 5 C viral protein 2 UNP residues 70-331 147712
143 5W3E 5 C viral protein 2 UNP residues 70-331 147712
144 5O5P 2 2 Capsid proteins, VP2 138950
145 5O5B 2 2 Capsid proteins 138950
146 5KWL 2 2 VP2 UNP residues 70-337 138950
147 5KTZ 2 2 VP2 UNP residues 70-338 138950
148 5KU0 2 2 VP2 UNP residues 70-338 138950
149 5KU2 2 2 VP2 UNP residues 70-337 138950
150 5K0U 3 C Capsid protein VP2 UNP residues 68-332 463676
151 3JD7 2 2 Capsid protein VP2 UNP residues 70-332 138949
152 3JBC 2 2 Capsid protein VP2 UNP residues 70-341 138950
153 3JBD 2 2 Capsid protein VP2 UNP residues 70-341 138950
154 3JBE 2 2 Capsid protein VP2 UNP residues 70-341 138950
155 3JBF 2 2 Capsid protein VP2 UNP residues 70-341 138950
156 3JBG 2 2 Capsid protein VP2 UNP residues 70-341 138950
157 3J9F 2 2 Protein VP2 UNP residues 70-341 138950
158 3J8F 2 2 Capsid protein VP2 UNP residues 70-341 138950
159 4C0U 2 B VP2 138948
160 4C0Y 2 B VP2 138948
161 4C10 4 B VP3 138948
162 3J48 2 2 Protein VP2 UNP residues 70-341 138950
163 4BIP 2 B VP2 138948
164 4BIQ 2 B VP2 HOMOLOGY MODEL OF COXSACKIEVIRUS A7 EMPTY CAPSID PROTEIN VP2 138948
165 3J3O 5 2 Protein VP2 UNP residues 70-341 138950
166 3J3P 4 2 Protein VP2 UNP residues 70-341 138950
167 3J2J 3 C Protein VP2 UNP residues 79-330 138949
168 3J22 2 B capsid protein VP0 UNP residues 82-318 138948
169 3J23 2 B capsid protein VP0 UNP residues 82-318 138948
170 3IYP 3 C Polyprotein 138949
171 3IYB 4 4 Genome polyprotein 138950 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
172 3IYC 4 4 Genome polyprotein 138950 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
173 3EPC 3 2 Protein VP2 138950
174 3EPD 4 2 protein VP2 138950
175 3EPF 3 2 Protein VP2 138950
176 2C8I 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
177 1Z7Z 2 2 human coxsackievirus A21 Viral Protein 2 residues 2010-2272 138950
178 1XYR 2 2 Genome polyprotein, Coat protein VP2 residues 96-332 138950
179 1UPN 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
180 1NN8 3 2 coat protein VP2 138950
181 1M11 3 2 COAT PROTEIN VP2 138949
182 1JEW 3 2 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP2 Residues 70-332 138949
183 1DGI 3 2 VP2 138950
184 1D3E 3 2 PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP2) 169066
185 1D3I 3 2 PROTEIN (RHINOVIRUS 14 COAT PROTEIN VP2) 169066
186 1VRH 2 2 RHINOVIRUS 14 147712
187 1RUC 2 2 RHINOVIRUS 14 147712
188 1RUD 2 2 RHINOVIRUS 14 147712
189 1RUE 2 2 RHINOVIRUS 14 147712
190 1RUF 2 2 RHINOVIRUS 14 147712
191 1RUG 2 2 RHINOVIRUS 14 147712
192 1RUH 2 2 RHINOVIRUS 14 147712
193 1RUI 2 2 RHINOVIRUS 14 147712
194 1RUJ 2 2 RHINOVIRUS 14 147712
195 1HRV 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
196 2HWB 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
197 2HWC 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
198 2HWD 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
199 2HWE 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
200 2HWF 2 2 HUMAN RHINOVIRUS 1A COAT PROTEIN (SUBUNIT VP2) 147711
201 1HRI 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
202 1R09 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
203 1R08 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
204 1RMU 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
205 2R04 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
206 2R06 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
207 2R07 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
208 2RM2 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
209 2RMU 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
210 2RR1 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
211 2RS1 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 169066
212 2RS3 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712
213 2RS5 2 2 HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) 147712