Sequence Similarity Clusters for the Entities in PDB 6ILO

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75344
95 % 1 1 53622
90 % 1 1 54281
70 % 1 1 39217
50 % 1 2 26657
40 % 1 9 8219
30 % 3 15 4741
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 12534
95 % 4 7 12332
90 % 4 7 12200
70 % 14 31 758
50 % 90 204 202
40 % 90 204 214
30 % 95 217 215
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 81984
95 % 4 7 11980
90 % 4 7 11749
70 % 14 31 760
50 % 99 216 180
40 % 99 218 191
30 % 120 259 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1D4M 3 3 PROTEIN (COXSACKIEVIRUS A9) VP3 138949
2 1H8T 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
3 1OOP 3 C Coat protein VP3 138949
4 1MQT 3 C Polyprotein Capsid Protein SVDV COAT PROTEIN VP3 138949
5 4GB3 3 3 coat protein 3 UNP residues 333-570 138949
6 2X5I 3 C VP3 138949
7 1COV 3 3 COXSACKIEVIRUS COAT PROTEIN 138949
8 1EV1 3 3 ECHOVIRUS 1 VP1, VP2, VP3, VP4 138949
9 6RJF 3 3 VP3 138949
10 6O06 3 C VP3 UNP residues 331-569 138949
11 6ILL 3 C Capsid protein VP3 138949
12 6ILM 3 C Capsid protein VP3 138949
13 6ILN 3 C Capsid protein VP3 138949
14 6ILO 3 C Capsid protein VP3 138949
15 6ILP 3 C Capsid protein VP3 138949
16 6ILJ 3 C Capsid protein VP3 138949
17 6ILK 3 C Capsid protein VP3 138949
18 6HHT 3 C1, C2, F1, F2, I1, I2, L1, L2, O1, O2, R1, R2, U1, U2, X1, X2, a2, d2, g2, j2, m2, p2, s2, v2, y2 Echovirus 18 capsid protein 3 138949
19 6HBG 3 C Echovirus 18 viral protein 3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
20 6HBH 3 C Echovirus 18 capsid protein 3 138949
21 6HBJ 3 C Viral protein 3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
22 6HBK 2 C, F, I, L, O, R, U, X, a, d, g Echovirus 18 capsid protein 2 138949
23 6HBL 3 C, F, I, L, O, R, U, X, a, d, g, j, m, p, s Echovirus 18 capsid protein 3 138949
24 6GZV 3 C Capsid protein VP3 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
25 3JD7 3 3 Capsid protein VP3 UNP residues 333-570 138949
26 3J2J 2 B Protein VP3 UNP residues 331-568 138949
27 3IYP 2 B Polyprotein 138949
28 2C8I 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
29 1UPN 3 C ECHOVIRUS 11 COAT PROTEIN VP3 138949
30 1M11 4 3 COAT PROTEIN VP3 138949
31 1JEW 4 3 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP3 Residues 333-570 138949