Sequence Similarity Clusters for the Entities in PDB 6ILO

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 84922
95 % 1 1 56588
90 % 1 1 53377
70 % 1 1 46443
50 % 1 2 32287
40 % 1 9 8172
30 % 3 15 5076
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 7 13656
95 % 4 7 13308
90 % 4 7 13121
70 % 14 31 840
50 % 113 233 191
40 % 113 233 207
30 % 118 246 213
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 88344
95 % 4 7 12817
90 % 4 7 12638
70 % 14 31 839
50 % 120 243 174
40 % 122 247 182
30 % 143 289 127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6ILL 3 C Capsid protein VP3 138949
2 6ILM 3 C Capsid protein VP3 138949
3 6ILN 3 C Capsid protein VP3 138949
4 6ILO 3 C Capsid protein VP3 138949
5 6ILP 3 C Capsid protein VP3 138949
6 6ILJ 3 C Capsid protein VP3 138949
7 6ILK 3 C Capsid protein VP3 138949