Sequence Similarity Clusters for the Entities in PDB 6IV6

Entity #1 | Chains: A
nuclease protein, length: 1261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66787
95 % 1 1 56508
90 % 1 1 43019
70 % 1 1 40497
50 % 1 1 35071
40 % 21 26 2152
30 % 25 30 1914
Entity #2 | Chains: G
RNA (59-MER) rna, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5XH6 1 A CRISPR-associated endonuclease Cpf1 1111120 3.1.21.1 | Details 4.6.1.22 | Details
2 5XH7 1 A CRISPR-associated endonuclease Cpf1 1111120 3.1.21.1 | Details 4.6.1.22 | Details
3 5XUZ 1 A, E LbCpf1 1410628
4 5XUT 1 A LbCpf1 1410628
5 5XUS 1 A LbCpf1 1410628
6 5ID6 1 A Cpf1 1410628
7 5XUU 1 A LbCpf1 1410628
8 5NFV 1 A CRISPR-associated endonuclease Cpf1 263 3.1.21.1 | Details 4.6.1.22 | Details
9 5B43 1 A CRISPR-associated endonuclease Cpf1 1111120 3.1.21.1 | Details 4.6.1.22 | Details
10 6I1L 1 A, D CRISPR-associated endonuclease Cas12a E1006Q 263 3.1.21.1 | Details 4.6.1.22 | Details
11 6I1K 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details
12 5MGA 1 A CRISPR-associated endonuclease Cpf1 263 3.1.21.1 | Details 4.6.1.22 | Details
13 5KK5 1 A CRISPR-associated endonuclease Cpf1 1111120 3.1.21.1 | Details 4.6.1.22 | Details
14 5NG6 1 A, C, E, G CRISPR-associated endonuclease Cpf1 SNA sequence at the N-terminus is derived from expression vector. 263 3.1.21.1 | Details 4.6.1.22 | Details
15 6KL9 1 A LbCas12a 1898203
16 6KLB 1 A, D LbCas12a 1898203
17 6P7M 1 A Cas12a 1410628
18 6P7N 2 A, E Cas12a 1410628
19 6OMV 4 B Cpf1 1410628
20 6NM9 2 B, D Cpf1 1410628
21 6NMA 2 B Cpf1 1410628
22 6NMC 1 A Cpf1 1410628
23 6NMD 1 A Cpf1 1410628
24 6NME 1 A Cpf1 1410628
25 6IV6 1 A nuclease 386891
26 6GTC 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details
27 6GTD 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details
28 6GTE 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details
29 6GTF 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details
30 6GTG 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details