Sequence Similarity Clusters for the Entities in PDB 6IV6

Entity #1 | Chains: A
nuclease protein, length: 1261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63243
95 % 1 1 49070
90 % 1 1 43464
70 % 1 1 46936
50 % 1 1 35316
40 % 21 26 2184
30 % 25 30 1943
Entity #2 | Chains: G
RNA (59-MER) rna, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5XUZ 1 A, E LbCpf1 1410628
2 5XUT 1 A LbCpf1 1410628
3 5XUS 1 A LbCpf1 1410628
4 5ID6 1 A Cpf1 1410628
5 5XUU 1 A LbCpf1 1410628
6 5NFV 1 A CRISPR-associated endonuclease Cpf1 263 3.1.21.1 | Details 4.6.1.22 | Details
7 6I1L 1 A, D CRISPR-associated endonuclease Cas12a E1006Q 263 3.1.21.1 | Details 4.6.1.22 | Details
8 6I1K 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details
9 5MGA 1 A CRISPR-associated endonuclease Cpf1 263 3.1.21.1 | Details 4.6.1.22 | Details
10 5NG6 1 A, C, E, G CRISPR-associated endonuclease Cpf1 SNA sequence at the N-terminus is derived from expression vector. 263 3.1.21.1 | Details 4.6.1.22 | Details
11 6KL9 1 A LbCas12a 1898203
12 6KLB 1 A, D LbCas12a 1898203
13 6P7M 1 A Cas12a 1410628
14 6P7N 2 A, E Cas12a 1410628
15 6OMV 4 B Cpf1 1410628
16 6NM9 2 B, D Cpf1 1410628
17 6NMA 2 B Cpf1 1410628
18 6NMC 1 A Cpf1 1410628
19 6NMD 1 A Cpf1 1410628
20 6NME 1 A Cpf1 1410628
21 6IV6 1 A nuclease 386891
22 6GTC 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details
23 6GTD 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details
24 6GTE 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details
25 6GTF 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details
26 6GTG 1 A CRISPR-associated endonuclease Cas12a 263 3.1.21.1 | Details 4.6.1.22 | Details