Sequence Similarity Clusters for the Entities in PDB 6IYI

Entity #1 | Chains: A
Alpha chain protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62561
95 % 1 1 46058
90 % 1 1 43736
70 % 2 2 27481
50 % 19 38 1016
40 % 23 43 926
30 % 310 783 10
Entity #2 | Chains: B
Beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73662
95 % 1 1 46057
90 % 2 2 29348
70 % 2 2 26488
50 % 284 735 7
40 % 284 735 7
30 % 311 783 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3D1K 1 A Hemoglobin subunit alpha-1 35730
2 2H8F 1 A, C Hemoglobin alpha subunit 40690
3 3BOM 1 A, C Hemoglobin subunit alpha-4 8022
4 3GKV 1 A Hemoglobin subunit alpha 40690
5 4ODC 1 A Hemoglobin subunit alpha 40690
6 4ESA 1 A, C Hemoglobin alpha chain 56733
7 2PEG 1 A Hemoglobin subunit alpha 40690
8 1CG5 1 A PROTEIN (HEMOGLOBIN) 31902
9 6IYH 1 A Alpha chain Sequence is derived from structure 61968
10 3GQG 1 A, C Hemoglobin subunit alpha 40690
11 1V4X 1 A, C hemoglobin alpha chain 8237
12 1V4W 1 A, C hemoglobin alpha chain 8237
13 2H8D 1 A, C Hemoglobin alpha subunit 40690
14 2AA1 1 A, C Hemoglobin alpha-1 chain 35730
15 2R1H 1 A, C Hemoglobin subunit alpha-4 8022
16 3BJ1 1 A, C hemoglobin alpha 8167
17 5LFG 1 A, C Hemoglobin subunit alpha-1 35730
18 1CG8 1 A PROTEIN (HEMOGLOBIN) 31902
19 3MKB 1 A, C Hemoglobin subunit alpha 57983
20 1SPG 1 A HEMOGLOBIN R-STATE, CARBONMONOXY BOUND ROOT EFFECT HEMOGLOBIN 59837
21 1LA6 1 A Hemoglobin alpha-1 chain 35730
22 1GCV 1 A, C HEMOGLOBIN ALPHA CHAIN 89020
23 6IYI 1 A Alpha chain Sequence is obtained from structure. 7903
24 3BJ2 1 A, C hemoglobin alpha 8167
25 3NFE 1 A, C Hemoglobin subunit alpha-1 35730
26 3W4U 1 A, C, E Hemoglobin subunit zeta 9606
27 1GCW 1 A, C PROTEIN (HEMOGLOBIN) ALPHA CHAIN 89020
28 1HBH 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 40690
29 1V4U 1 A, C hemoglobin alpha chain 8237
30 1XQ5 1 A, C Hemoglobin alpha-1 chain 8167
31 1OUT 1 A HEMOGLOBIN I DEOXY 8022
32 3BJ3 1 A, C hemoglobin alpha 8167
33 1T1N 1 A PROTEIN (HEMOGLOBIN) HEM GROUP IS COMPLEXED WITH CARBON MONOXIDE 35730
34 1JEB 1 A, C HEMOGLOBIN ZETA CHAIN 9606
35 3NG6 1 A, C Hemoglobin subunit alpha-1 35730
36 3BCQ 1 A, C Alpha-chain hemoglobin 126311
37 1OUU 1 A, C HEMOGLOBIN I CARBONMONOXY 8022
38 4IRO 1 A, C Hemoglobin subunit alpha 40690
39 1PBX 1 A HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) 40690
40 1S5X 1 A Hemoglobin alpha chain 40690
41 4G51 1 A, C Hemoglobin subunit alpha 40690
42 1S5Y 1 A, C Hemoglobin alpha chain 40690
43 6HIT 1 A, C, E, G Hemoglobin alpha 2 chain 8049