6IYI

X-ray sequence and high resolution crystal structure of Starry sturgeon methemoglobin


Sequence Similarity Clusters for the Entities in PDB 6IYI

Entity #1 | Chains: A
Alpha chain protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75479
95 % 1 1 48835
90 % 1 1 46278
70 % 2 2 33365
50 % 20 39 1096
40 % 24 44 984
30 % 356 835 11
Entity #2 | Chains: B
Beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64240
95 % 1 1 48834
90 % 2 2 31291
70 % 2 2 28117
50 % 329 786 6
40 % 329 786 7
30 % 357 835 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3D1K 1 A Hemoglobin subunit alpha-1 35730
2 2H8F 1 A, C Hemoglobin alpha subunit 40690
3 3BOM 1 A, C Hemoglobin subunit alpha-4 8022
4 3GKV 1 A Hemoglobin subunit alpha 40690
5 6RP5 1 A Hemoglobin subunit alpha 1 56733
6 4ODC 1 A Hemoglobin subunit alpha 40690
7 4ESA 1 A, C Hemoglobin alpha chain 56733
8 2PEG 1 A Hemoglobin subunit alpha 40690
9 1CG5 1 A PROTEIN (HEMOGLOBIN) 2704970
10 6IYH 1 A Alpha chain Sequence is derived from structure 61968
11 3GQG 1 A, C Hemoglobin subunit alpha 40690
12 1V4X 1 A, C hemoglobin alpha chain 8237
13 1V4W 1 A, C hemoglobin alpha chain 8237
14 2H8D 1 A, C Hemoglobin alpha subunit 40690
15 2AA1 1 A, C Hemoglobin alpha-1 chain 35730
16 2R1H 1 A, C Hemoglobin subunit alpha-4 8022
17 3BJ1 1 A, C hemoglobin alpha 8167
18 5LFG 1 A, C Hemoglobin subunit alpha-1 35730
19 1CG8 1 A PROTEIN (HEMOGLOBIN) 2704970
20 3MKB 1 A, C Hemoglobin subunit alpha 57983
21 1SPG 1 A HEMOGLOBIN R-STATE, CARBONMONOXY BOUND ROOT EFFECT HEMOGLOBIN 59837
22 1LA6 1 A Hemoglobin alpha-1 chain 35730
23 1GCV 1 A, C HEMOGLOBIN ALPHA CHAIN 89020
24 6IYI 1 A Alpha chain Sequence is obtained from structure. 7903
25 3BJ2 1 A, C hemoglobin alpha 8167
26 3NFE 1 A, C Hemoglobin subunit alpha-1 35730
27 3W4U 1 A, C, E Hemoglobin subunit zeta 9606
28 1GCW 1 A, C PROTEIN (HEMOGLOBIN) ALPHA CHAIN 89020
29 1HBH 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 40690
30 1V4U 1 A, C hemoglobin alpha chain 8237
31 1XQ5 1 A, C Hemoglobin alpha-1 chain 8167
32 1OUT 1 A HEMOGLOBIN I DEOXY 8022
33 3BJ3 1 A, C hemoglobin alpha 8167
34 1T1N 1 A PROTEIN (HEMOGLOBIN) HEM GROUP IS COMPLEXED WITH CARBON MONOXIDE 35730
35 1JEB 1 A, C HEMOGLOBIN ZETA CHAIN 9606
36 3NG6 1 A, C Hemoglobin subunit alpha-1 35730
37 3BCQ 1 A, C Alpha-chain hemoglobin 126311
38 1OUU 1 A, C HEMOGLOBIN I CARBONMONOXY 8022
39 4IRO 1 A, C Hemoglobin subunit alpha 40690
40 1PBX 1 A HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) 40690
41 1S5X 1 A Hemoglobin alpha chain 40690
42 4G51 1 A, C Hemoglobin subunit alpha 40690
43 1S5Y 1 A, C Hemoglobin alpha chain 40690
44 6HIT 1 A, C, E, G Hemoglobin alpha 2 chain 8049