Sequence Similarity Clusters for the Entities in PDB 6IYI

Entity #1 | Chains: A
Alpha chain protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62561
95 % 1 1 46058
90 % 1 1 43736
70 % 2 2 27481
50 % 19 38 1016
40 % 23 43 926
30 % 310 783 10
Entity #2 | Chains: B
Beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73662
95 % 1 1 46057
90 % 2 2 29348
70 % 2 2 26488
50 % 284 735 7
40 % 284 735 7
30 % 311 783 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3D1K 1 A Hemoglobin subunit alpha-1 35730
2 2H8F 1 A, C Hemoglobin alpha subunit 40690
3 3BOM 1 A, C Hemoglobin subunit alpha-4 8022
4 3GKV 1 A Hemoglobin subunit alpha 40690
5 4ODC 1 A Hemoglobin subunit alpha 40690
6 4ESA 1 A, C Hemoglobin alpha chain 56733
7 2PEG 1 A Hemoglobin subunit alpha 40690
8 6IYH 1 A Alpha chain Sequence is derived from structure 61968
9 3GQG 1 A, C Hemoglobin subunit alpha 40690
10 1V4X 1 A, C hemoglobin alpha chain 8237
11 1V4W 1 A, C hemoglobin alpha chain 8237
12 2H8D 1 A, C Hemoglobin alpha subunit 40690
13 2AA1 1 A, C Hemoglobin alpha-1 chain 35730
14 2R1H 1 A, C Hemoglobin subunit alpha-4 8022
15 3BJ1 1 A, C hemoglobin alpha 8167
16 5LFG 1 A, C Hemoglobin subunit alpha-1 35730
17 1SPG 1 A HEMOGLOBIN R-STATE, CARBONMONOXY BOUND ROOT EFFECT HEMOGLOBIN 59837
18 1LA6 1 A Hemoglobin alpha-1 chain 35730
19 6IYI 1 A Alpha chain Sequence is obtained from structure. 7903
20 3BJ2 1 A, C hemoglobin alpha 8167
21 3NFE 1 A, C Hemoglobin subunit alpha-1 35730
22 3W4U 1 A, C, E Hemoglobin subunit zeta 9606
23 1HBH 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 40690
24 1V4U 1 A, C hemoglobin alpha chain 8237
25 1XQ5 1 A, C Hemoglobin alpha-1 chain 8167
26 1OUT 1 A HEMOGLOBIN I DEOXY 8022
27 3BJ3 1 A, C hemoglobin alpha 8167
28 1T1N 1 A PROTEIN (HEMOGLOBIN) HEM GROUP IS COMPLEXED WITH CARBON MONOXIDE 35730
29 1JEB 1 A, C HEMOGLOBIN ZETA CHAIN 9606
30 3NG6 1 A, C Hemoglobin subunit alpha-1 35730
31 3BCQ 1 A, C Alpha-chain hemoglobin 126311
32 1OUU 1 A, C HEMOGLOBIN I CARBONMONOXY 8022
33 4IRO 1 A, C Hemoglobin subunit alpha 40690
34 1PBX 1 A HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) 40690
35 1S5X 1 A Hemoglobin alpha chain 40690
36 4G51 1 A, C Hemoglobin subunit alpha 40690
37 1S5Y 1 A, C Hemoglobin alpha chain 40690
38 6HIT 1 A, C, E, G Hemoglobin alpha 2 chain 8049