Sequence Similarity Clusters for the Entities in PDB 6IYI

Entity #1 | Chains: A
Alpha chain protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61743
95 % 1 1 59791
90 % 1 1 44594
70 % 2 2 28110
50 % 20 39 1020
40 % 24 44 924
30 % 314 793 12
Entity #2 | Chains: B
Beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61742
95 % 1 1 47024
90 % 2 2 30039
70 % 2 2 27075
50 % 287 744 6
40 % 287 744 7
30 % 315 793 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3D1K 1 A Hemoglobin subunit alpha-1 35730
2 2H8F 1 A, C Hemoglobin alpha subunit 40690
3 3BOM 1 A, C Hemoglobin subunit alpha-4 8022
4 3GKV 1 A Hemoglobin subunit alpha 40690
5 6RP5 1 A Hemoglobin subunit alpha 1 56733
6 4ODC 1 A Hemoglobin subunit alpha 40690
7 4ESA 1 A, C Hemoglobin alpha chain 56733
8 2PEG 1 A Hemoglobin subunit alpha 40690
9 6IYH 1 A Alpha chain Sequence is derived from structure 61968
10 3GQG 1 A, C Hemoglobin subunit alpha 40690
11 1V4X 1 A, C hemoglobin alpha chain 8237
12 1V4W 1 A, C hemoglobin alpha chain 8237
13 2H8D 1 A, C Hemoglobin alpha subunit 40690
14 2AA1 1 A, C Hemoglobin alpha-1 chain 35730
15 2R1H 1 A, C Hemoglobin subunit alpha-4 8022
16 3BJ1 1 A, C hemoglobin alpha 8167
17 5LFG 1 A, C Hemoglobin subunit alpha-1 35730
18 1SPG 1 A HEMOGLOBIN R-STATE, CARBONMONOXY BOUND ROOT EFFECT HEMOGLOBIN 59837
19 1LA6 1 A Hemoglobin alpha-1 chain 35730
20 6IYI 1 A Alpha chain Sequence is obtained from structure. 7903
21 3BJ2 1 A, C hemoglobin alpha 8167
22 3NFE 1 A, C Hemoglobin subunit alpha-1 35730
23 3W4U 1 A, C, E Hemoglobin subunit zeta 9606
24 1HBH 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 40690
25 1V4U 1 A, C hemoglobin alpha chain 8237
26 1XQ5 1 A, C Hemoglobin alpha-1 chain 8167
27 1OUT 1 A HEMOGLOBIN I DEOXY 8022
28 3BJ3 1 A, C hemoglobin alpha 8167
29 1T1N 1 A PROTEIN (HEMOGLOBIN) HEM GROUP IS COMPLEXED WITH CARBON MONOXIDE 35730
30 1JEB 1 A, C HEMOGLOBIN ZETA CHAIN 9606
31 3NG6 1 A, C Hemoglobin subunit alpha-1 35730
32 3BCQ 1 A, C Alpha-chain hemoglobin 126311
33 1OUU 1 A, C HEMOGLOBIN I CARBONMONOXY 8022
34 4IRO 1 A, C Hemoglobin subunit alpha 40690
35 1PBX 1 A HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) 40690
36 1S5X 1 A Hemoglobin alpha chain 40690
37 4G51 1 A, C Hemoglobin subunit alpha 40690
38 1S5Y 1 A, C Hemoglobin alpha chain 40690
39 6HIT 1 A, C, E, G Hemoglobin alpha 2 chain 8049